RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 BTBD9Q96Q07 612 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GSDMAQ96QA5 445 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TRIB3Q96RU7 358 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TIMP4Q99727 224 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TMEM204Q9BSN7 226 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 THAP7Q9BT49 309 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 MMP27Q9H306 513 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TRABDQ9H4I3 376 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ZCCHC4Q9H5U6 513 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 METTL17Q9H7H0 456 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ADAP2Q9NPF8 381 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ETNK2Q9NVF9 386 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TBCCD1Q9NVR7 557 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PARPBPQ9NWS1 579 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 QPCTLQ9NXS2 382 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 GAR1Q9NY12 217 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TUBA8Q9NY65 449 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 ELOVL5Q9NYP7 299 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 HCN3Q9P1Z3 774 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 FBXW2Q9UKT8 454 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 TTC7AQ9ULT0 858 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 BOKQ9UMX3 212 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 PKP3Q9Y446 797 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 KLK4Q9Y5K2 254 aa3.61□□□□□ -1.83
ECHDC1-211ENST00000460558 CENPVL1A0A0U1RR11 272 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR2A25A4D2G3 310 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PGPEP1LA6NFU8 196 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FRG2CA6NGY1 282 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM90A7PA6NKC0 464 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 C3orf70A6NLC5 250 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM90A22PA8MWA6 464 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM90A12PA8MX19 464 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FAM90A23PA8MXZ1 464 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PSMD9O00233 223 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 CDC7O00311 574 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PSMA7O14818 248 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 LIN7AO14910 233 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SCAMP2O15127 329 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 CDC123O75794 336 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR2J2O76002 312 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RNF8O76064 485 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR6B1O95007 311 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RCBTB2O95199 551 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 NSA2O95478 260 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 GNA14O95837 355 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FTCDO95954 541 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RPN2P04844 631 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 CALB1P05937 261 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 MMP2P08253 660 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 HKR1P10072 659 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 CYP4B1P13584 511 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 ATP1B2P14415 290 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 MATN1P21941 496 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 IL10P22301 178 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PTPN3P26045 913 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 ABCD3P28288 659 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 ACADLP28330 430 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PCK1P35558 622 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SOX3P41225 446 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 NSFP46459 744 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RPL7AP62424 266 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RHAGQ02094 409 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 BMPR2Q13873 1038 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 EXOC3L4Q17RC7 722 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 ZNF658BQ4V348 819 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 LIPMQ5VYY2 423 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 DNAJC24Q6P3W2 148 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 DCUN1D2Q6PH85 259 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PLXDC2Q6UX71 529 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 GBP6Q6ZN66 633 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 PTCHD4Q6ZW05 846 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 Q6ZWC4 215 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 GCNT2Q8N0V5 402 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 LRRC25Q8N386 305 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 ZNF525Q8N782 197 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SNX31Q8N9S9 440 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 LMNTD1Q8N9Z9 388 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 BEND2Q8NDZ0 799 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR2L3Q8NG85 312 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR9A4Q8NGU2 314 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR2L8Q8NGY9 312 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 C10orf105Q8TEF2 133 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 TSLPQ969D9 159 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RNF125Q96EQ8 232 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 C11orf24Q96F05 449 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 OR1F2PQ96R84 312 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SNX18Q96RF0 628 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SERINC2Q96SA4 455 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 KRT12Q99456 494 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 COPS8Q99627 209 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 CCDC77Q9BR77 488 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 CHCHD6Q9BRQ6 235 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 TRAF4Q9BUZ4 470 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 C1QTNF3Q9BXJ4 246 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SLITRK2Q9H156 845 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SYNPO2LQ9H987 977 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 SAP30LQ9HAJ7 183 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 FAIMQ9NVQ4 179 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 RMND1Q9NWS8 449 aa3.6□□□□□ -1.83
ECHDC1-211ENST00000460558 AIPL1Q9NZN9 384 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms