RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IL23RQ5VWK5 629 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 REP15Q6BDI9 236 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 CWC27Q6UX04 472 aaKnown RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 ADAMTSL5Q6ZMM2 481 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 TMEM26Q6ZUK4 368 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 SLC25A42Q86VD7 318 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 RANBP3LQ86VV4 465 aaPredicted RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 MLKLQ8NB16 471 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 SUMF1Q8NBK3 374 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 OR56B1Q8NGI3 324 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 UBE2Q2Q8WVN8 375 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 ITLN1Q8WWA0 313 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 ANKRD9Q96BM1 317 aaPredicted RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 NDUFAF3Q9BU61 184 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 RBM24Q9BX46 236 aaKnown RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 TAS2R16Q9NYV7 291 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 CLIP2Q9UDT6 1046 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 PURGQ9UJV8 347 aaKnown RBP2.66□□□□□ -1.98
RFC4-211ENST00000460408 PLA2G4CQ9UP65 541 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 STRCP1A6NGW2 1772 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 KIF27Q86VH2 1401 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 CAMTA1Q9Y6Y1 1673 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 DIP2CQ9Y2E4 1556 aa2.66□□□□□ -1.98
RFC4-211ENST00000460408 XIRP1Q702N8 1843 aaKnown RBP2.65□□□□□ -1.98
RFC4-211ENST00000460408 NLRP1Q9C000 1473 aa2.65□□□□□ -1.98
RFC4-211ENST00000460408 AHDC1Q5TGY3 1603 aaPredicted RBP2.65□□□□□ -1.98
RFC4-211ENST00000460408 CARMIL1Q5VZK9 1371 aa2.65□□□□□ -1.98
RFC4-211ENST00000460408 PARD3Q8TEW0 1356 aa2.65□□□□□ -1.98
RFC4-211ENST00000460408 BIVM-ERCC5R4GMW8 1640 aa2.65□□□□□ -1.98
RFC4-211ENST00000460408 A0A1B0GTH9 108 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 MCF2LO15068 1137 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 TOXO94900 526 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 PTBP3O95758 552 aaKnown RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 ECDO95905 644 aaPredicted RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 IGHV3-9P01782 118 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 MT-ND1P03886 318 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 FUT1P19526 365 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 MAPK3P27361 379 aaPredicted RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 SAA4P35542 130 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 MATKP42679 507 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 CAMLGP49069 296 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 CSRP3P50461 194 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 VCPP55072 806 aaKnown RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 HAND2P61296 217 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 ZNF85Q03923 595 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 ZFP36L1Q07352 338 aaKnown RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 TAF3Q5VWG9 929 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 RBM43Q6ZSC3 357 aaKnown RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 PAQR9Q6ZVX9 377 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 ZSCAN30Q86W11 494 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 PYROXD2Q8N2H3 581 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 BEST4Q8NFU0 473 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 FOXN4Q96NZ1 517 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 KCNK16Q96T55 309 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 NMNAT2Q9BZQ4 307 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 UBXN6Q9BZV1 441 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 ADGRL4Q9HBW9 690 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 SOHLH2Q9NX45 425 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 ZNF581Q9P0T4 197 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 MBD2Q9UBB5 411 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 SEC14L4Q9UDX3 406 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 CLCA3PQ9Y6N3 262 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 CLTCQ00610 1675 aaKnown RBP2.65□□□□□ -1.99
RFC4-211ENST00000460408 SPHKAPQ2M3C7 1700 aa2.65□□□□□ -1.99
RFC4-211ENST00000460408 IGHV3OR16-12A0A075B7B8 117 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 NPIPA5A0A0B4J1W7 369 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 BICDL2A1A5D9 508 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 C19orf81C9J6K1 198 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 NPIPA5E9PKD4 350 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 PDLIM1O00151 329 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 RASGRF2O14827 1237 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 PHF1O43189 567 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 STAM2O75886 525 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 NDUFA7O95182 113 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 ACADSP16219 412 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 DNAJB1P25685 340 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 CALML3P27482 149 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 PTPN6P29350 595 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 CD86P42081 329 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 MFAP2P55001 183 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 SLC26A5P58743 744 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 GABPB1Q06547 395 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 ZNF33BQ06732 778 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 BTG3Q14201 252 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 KARSQ15046 597 aaKnown RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 C14orf28Q4W4Y0 310 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 CCDC92Q53HC0 331 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 SEL1L2Q5TEA6 688 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 FAM219BQ5XKK7 198 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 CCBE1Q6UXH8 406 aaPredicted RBP2.64□□□□□ -1.99
RFC4-211ENST00000460408 STOX1Q6ZVD7 989 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 GOLGA7Q7Z5G4 137 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 SYVN1Q86TM6 617 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 LUZP1Q86V48 1076 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 ARFGAP2Q8N6H7 521 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 FAM71CQ8NEG0 241 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 OR6T1Q8NGN1 323 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 CRYGNQ8WXF5 182 aa2.64□□□□□ -1.99
RFC4-211ENST00000460408 DLX4Q92988 240 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms