RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 EFR3AQ14156 821 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 FLYWCH1Q4VC44 716 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 CT45A2Q5DJT8 189 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 ZPLD1Q8TCW7 415 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 EBPLQ9BY08 206 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 STMN4Q9H169 189 aaPredicted RBP20.74■□□□□ 0.91
PTPN4-207ENST00000460162 EPB41L4BQ9H329 900 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 CALHM2Q9HA72 323 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 MID1IP1Q9NPA3 183 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 DNAJB12Q9NXW2 375 aaKnown RBP20.74■□□□□ 0.91
PTPN4-207ENST00000460162 CRIM1Q9NZV1 1036 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 TIMM22Q9Y584 194 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 WIF1Q9Y5W5 379 aa20.74■□□□□ 0.91
PTPN4-207ENST00000460162 PLOD3O60568 738 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 REM1O75628 298 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 ANXA4P09525 319 aaPredicted RBP20.73■□□□□ 0.91
PTPN4-207ENST00000460162 FAM153BP0C7A2 387 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 CPN1P15169 458 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 DNAJA1P31689 397 aaKnown RBP20.73■□□□□ 0.91
PTPN4-207ENST00000460162 CORO7P57737 925 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 FAM153CQ494X1 144 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 ENPP6Q6UWR7 440 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 WDSUB1Q8N9V3 476 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 OR14L1PQ8NHC6 308 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 KAT2AQ92830 837 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 NINJ1Q92982 152 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 ANKRA2Q9H9E1 313 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 FOLH1BQ9HBA9 442 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 TBK1Q9UHD2 729 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 EMCNQ9ULC0 261 aa20.73■□□□□ 0.91
PTPN4-207ENST00000460162 MED12Q93074 2177 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 C2orf72A6NCS6 295 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 TSPAN2O60636 221 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 COQ9O75208 318 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 SLITRK5O94991 958 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 MYL2P10916 166 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 CYP4B1P13584 511 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 DDCP20711 480 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 CTSSP25774 331 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 IL12BP29460 328 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 MPIP34949 423 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 NPSR1Q6W5P4 371 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 ZYG11AQ6WRX3 759 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 IFNEQ86WN2 208 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 PLCZ1Q86YW0 608 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 CCNYL1Q8N7R7 359 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 FAM222BQ8WU58 562 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 RNF138Q8WVD3 245 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 ADOQ96SZ5 270 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 RHOXF2Q9BQY4 288 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 POLDIP3Q9BY77 421 aaKnown RBP20.72■□□□□ 0.91
PTPN4-207ENST00000460162 TAS2R9Q9NYW1 312 aa20.72■□□□□ 0.91
PTPN4-207ENST00000460162 HRNRQ86YZ3 2850 aaPredicted RBP20.71■□□□□ 0.91
PTPN4-207ENST00000460162 FAM221AA4D161 298 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 H0Y3Z8 333 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 IL18BPO95998 194 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 SRD5A2P31213 254 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 OPRM1P35372 400 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 ART1P52961 327 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 PNLIPRP2P54317 469 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 FOXA1P55317 472 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 MRPS22P82650 360 aaKnown RBP20.71■□□□□ 0.91
PTPN4-207ENST00000460162 SNTB1Q13884 538 aaKnown RBP20.71■□□□□ 0.91
PTPN4-207ENST00000460162 IMPG1Q17R60 797 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 SPDYAQ5MJ70 313 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 OR7G2Q8NG99 324 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 ZFP3Q96NJ6 502 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 BBS4Q96RK4 519 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 GPATCH1Q9BRR8 931 aaKnown RBP20.71■□□□□ 0.91
PTPN4-207ENST00000460162 CLEC4MQ9H2X3 399 aaPredicted RBP20.71■□□□□ 0.91
PTPN4-207ENST00000460162 MIEF1Q9NQG6 463 aa20.71■□□□□ 0.91
PTPN4-207ENST00000460162 A0A087WV62 115 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 G3V2L1 256 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 UBFD1O14562 309 aaKnown RBP20.7■□□□□ 0.9
PTPN4-207ENST00000460162 GFRA1P56159 465 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 SORDQ00796 357 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 BTKQ06187 659 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 ZNF155Q12901 538 aaPredicted RBP20.7■□□□□ 0.9
PTPN4-207ENST00000460162 AAGABQ6PD74 315 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 SCIMPQ6UWF3 145 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 FRMD7Q6ZUT3 714 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 LARP4Q71RC2 724 aaKnown RBP eCLIP20.7■□□□□ 0.9
PTPN4-207ENST00000460162 KIF18BQ86Y91 864 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 C9orf106Q8NAJ2 232 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 FAM76AQ8TAV0 307 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 NRGNQ92686 78 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 TUBA1CQ9BQE3 449 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 MYNNQ9NPC7 610 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 RASSF1Q9NS23 344 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 TAS2R10Q9NYW0 307 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 GRID1Q9ULK0 1009 aa20.7■□□□□ 0.9
PTPN4-207ENST00000460162 WBP11Q9Y2W2 641 aaKnown RBP20.7■□□□□ 0.9
PTPN4-207ENST00000460162 A6NNC1 897 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 MYO1GB0I1T2 1018 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 EEF1E1-BLOC1S5C9J1V9 151 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 EEF1E1O43324 174 aaKnown RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 RSL1D1O76021 490 aaKnown RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 PROCP04070 461 aa20.69■□□□□ 0.9
PTPN4-207ENST00000460162 TMIGD3P0DMS9 266 aaPredicted RBP20.69■□□□□ 0.9
PTPN4-207ENST00000460162 TACR1P25103 407 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms