RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 RILPQ96NA2 401 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 BTBD2Q9BX70 525 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 ANGPTL4Q9BY76 406 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 PIGUQ9H490 435 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 METTL7AQ9H8H3 244 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 CNOT11Q9UKZ1 510 aaKnown RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 CORO2BQ9UQ03 480 aa9.86□□□□□ -0.83
UBR4-208ENST00000459947 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.86□□□□□ -0.83
UBR4-208ENST00000459947 PRAMEF25A6NGN4 478 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 C6orf47O95873 294 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 ATP6V1C1P21283 382 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 ABCD3P28288 659 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 POU6F2P78424 691 aaPredicted RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 MRPS35P82673 323 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.85□□□□□ -0.83
UBR4-208ENST00000459947 GHDCQ8N2G8 530 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 CISD2Q8N5K1 135 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 GRHL3Q8TE85 626 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 OR52E6Q96RD3 313 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 SLX1AQ9BQ83 275 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 OSBPL11Q9BXB4 747 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 SLCO1B3Q9NPD5 702 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 HRKO00198 91 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 TFECO14948 347 aaPredicted RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 PGRP06401 933 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 ALDOCP09972 364 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 PLA2G2AP14555 144 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 CDK9P50750 372 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 POLR2JP52435 117 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 GNA13Q14344 377 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 OR4F3Q6IEY1 312 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 KRTCAP2Q8N6L1 136 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 COX18Q8N8Q8 333 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 SNRNP40Q96DI7 357 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 FAM120BQ96EK7 910 aaKnown RBP9.85□□□□□ -0.83
UBR4-208ENST00000459947 KLHL14Q9P2G3 628 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 ARFIP2P53365 341 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 FAM174BQ3ZCQ3 159 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 SPINK14Q6IE38 97 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 SZRD1Q7Z422 152 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 FAM109AQ8N4B1 249 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 DIO2Q92813 273 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 HGDQ93099 445 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 ZBTB9Q96C00 473 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 FRMD6Q96NE9 622 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 ZFP64Q9NPA5 681 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 KLHL1Q9NR64 748 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 CALML5Q9NZT1 146 aa9.85□□□□□ -0.83
UBR4-208ENST00000459947 RNF103-CHMP3A0A140T963 221 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 A0A1W2PS29 197 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 TMEM247A6NEH6 219 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 TSPAN2O60636 221 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 HCN1O60741 890 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 WISP1O95388 367 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 PRB1P04280 392 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MASP1P48740 699 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 KCNJ2P63252 427 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 DUSP8Q13202 625 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 ZSWIM7Q19AV6 140 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 EXOSC6Q5RKV6 272 aaKnown RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 CROCCQ5TZA2 2017 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 ZNF324BQ6AW86 544 aaPredicted RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 ANKRD26P1Q6NSI1 321 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 ZNF527Q8NB42 609 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 GPR151Q8TDV0 419 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 GPR137Q96N19 417 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 CACYBPQ9HB71 228 aaKnown RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 SIRT3Q9NTG7 399 aaPredicted RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 LIPT1Q9Y234 373 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 SNX8Q9Y5X2 465 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 FAM47E-STBD1D6RA91 191 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 H3BNH8 94 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MAN1A2O60476 641 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 ABCB1P08183 1280 aaPredicted RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 CHI3L1P36222 383 aaPredicted RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 PIGAP37287 484 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 SPANXN4Q5MJ08 99 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 SULF2Q8IWU5 870 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 OR52B2Q96RD2 323 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 DOHHQ9BU89 302 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 SEC14L3Q9UDX4 400 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 HOXD4P09016 255 aaPredicted RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 CT45A8P0DMV1 189 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 CT45A9P0DMV2 189 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MSX1P28360 303 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MAP3K8P41279 467 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 CT45A2Q5DJT8 189 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MAVSQ7Z434 540 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MAGED4Q96JG8 741 aa9.84□□□□□ -0.83
UBR4-208ENST00000459947 MRPS18CQ9Y3D5 142 aaKnown RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 CHCHD2Q9Y6H1 151 aaPredicted RBP9.84□□□□□ -0.83
UBR4-208ENST00000459947 OR14I1A6ND48 311 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 LINC01387J3KSC0 135 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 ANP32DO95626 131 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 UFM1P61960 85 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 ZNF468Q5VIY5 522 aaPredicted RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 MTERF4Q7Z6M4 381 aaKnown RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.83□□□□□ -0.84
UBR4-208ENST00000459947 RNF138Q8WVD3 245 aa9.83□□□□□ -0.84
UBR4-208ENST00000459947 NEURL3Q96EH8 262 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms