RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 LYPD4Q6UWN0 246 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 RSPO2Q6UXX9 243 aaPredicted RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SERPINA11Q86U17 422 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 ZDHHC17Q8IUH5 632 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 LSM14AQ8ND56 463 aaKnown RBP4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SETD9Q8NE22 299 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 OR4A4PQ8NGN8 299 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CDC26Q8NHZ8 85 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 WFDC5Q8TCV5 224 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 UFD1Q92890 307 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 APOL4Q9BPW4 351 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MICU1Q9BPX6 476 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 H2AFJQ9BTM1 129 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 CHIAQ9BZP6 476 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 TRIM15Q9C019 465 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PLA2G2EQ9NZK7 142 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 COPZ2Q9P299 210 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC22A14Q9Y267 594 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 PLXNA2O75051 1894 aa4.27□□□□□ -1.73
DEPDC1-202ENST00000456315 MEIKINA0A087WXM9 373 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PRR32B1ATL7 298 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TNFRSF11BO00300 401 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 BTN3A3O00478 584 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CDC42EP2O14613 210 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC30A4O14863 429 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SMAD6O43541 496 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 EIF4E2O60573 245 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PPP1R3DO95685 299 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ALDOBP05062 364 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 LGALS2P05162 132 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 NUP62P37198 522 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CAPZA2P47755 286 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 GPR33Q49SQ1 333 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF836Q6ZNA1 936 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 JAZF1Q86VZ6 243 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SIAH3Q8IW03 269 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SERPINA12Q8IW75 414 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 RTL3Q8N8U3 475 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 OR4D10Q8NGI6 311 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ENKURQ8TC29 256 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ADAMTS14Q8WXS8 1223 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 KCTD13Q8WZ19 329 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 KLHL6Q8WZ60 621 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PIGKQ92643 395 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CIDECQ96AQ7 238 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CACNG6Q9BXT2 260 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MAGIXQ9H6Y5 334 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CATSPERZQ9NTU4 200 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TAS2R13Q9NYV9 303 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 HACL1Q9UJ83 578 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZGRF1Q86YA3 2104 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 OR6C68A6NDL8 312 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 NCAM2O15394 837 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 FABP3P05413 133 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 EPXP11678 715 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 FGF9P31371 208 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 AHRP35869 848 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 AKR1C3P42330 323 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PTGFRP43088 359 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 NPBWR1P48145 328 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 VEGFCP49767 419 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 DDX39BQ13838 428 aaKnown RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 DMC1Q14565 340 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ATP13A5Q4VNC0 1218 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 C3orf38Q5JPI3 329 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TMEM201Q5SNT2 666 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 KRT74Q7RTS7 529 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZBTB8OSQ8IWT0 167 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ATPAF2Q8N5M1 289 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 HORMAD2Q8N7B1 307 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC25A43Q8WUT9 341 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SFT2D1Q8WV19 159 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 DNAJA4Q8WW22 397 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PHF21AQ96BD5 680 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MTERF3Q96E29 417 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF354BQ96LW1 612 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SPATA33Q96N06 139 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ARHGAP9Q9BRR9 750 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 PPA2Q9H2U2 334 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 OR51J1Q9H342 316 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 AKT3Q9Y243 479 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CSNK1G3Q9Y6M4 447 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TEX13CA0A0J9YWL9 993 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CENPVL1A0A0U1RR11 272 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 OR2M5A3KFT3 312 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 GRXCR2A6NFK2 248 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CHURC1-FNTBB4DL54 471 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CNMDO75829 334 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 DDNO94850 711 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CCNB2O95067 398 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 IL1AP01583 271 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 MT-ND4P03905 459 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CRYBA1P05813 215 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC6A4P31645 630 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 ACLYP53396 1101 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 CRISP1P54107 249 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 TDGQ13569 410 aa4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 HLXQ14774 488 aaPredicted RBP4.26□□□□□ -1.73
DEPDC1-202ENST00000456315 OPCMLQ14982 345 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms