RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 SHC2P98077 582 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 CSTF1Q05048 431 aaKnown RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 NAE1Q13564 534 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TRA2AQ13595 282 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 GRB7Q14451 532 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 RPE65Q16518 533 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 RBBP7Q16576 425 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF542PQ5EBM4 170 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 CXorf66Q5JRM2 361 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 PRR31Q5SQ13 230 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 VWA5B1Q5TIE3 1220 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 SHEQ5VZ18 495 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 FAM91A1Q658Y4 838 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 AGTRAPQ6RW13 159 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 GPRIN3Q6ZVF9 776 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF551Q7Z340 670 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 GOLGA7Q7Z5G4 137 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 SYVN1Q86TM6 617 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 CUZD1Q86UP6 607 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 WDR5BQ86VZ2 330 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 LONP2Q86WA8 852 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 KLHDC8AQ8IYD2 350 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 KIRREL3Q8IZU9 778 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 FAM109AQ8N4B1 249 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM105Q8N8V8 129 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 SCAIQ8N9R8 606 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR5AR1Q8NGP9 310 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR5K2Q8NHB8 316 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCL4L1Q8NHW4 92 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 AGR3Q8TD06 166 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 MAPK15Q8TD08 544 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 MAGEC3Q8TD91 643 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 AGAP11Q8TF27 550 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMEM125Q96AQ2 219 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 RAD51AP1Q96B01 352 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 FAM210AQ96ND0 272 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 ZNF382Q96SR6 550 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 NTMT1Q9BV86 223 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 ACTRT3Q9BYD9 372 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 ATG10Q9H0Y0 220 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TCEAL2Q9H3H9 227 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 NOL11Q9H8H0 719 aaKnown RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TM9SF3Q9HD45 589 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC35D1Q9NTN3 355 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 DNAJC11Q9NVH1 559 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 OPTCQ9UBM4 332 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 MGAT4CQ9UBM8 478 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 CIDEBQ9UHD4 219 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 IL17BQ9UHF5 180 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC22A14Q9Y267 594 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 ASF1AQ9Y294 204 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TDRKHQ9Y2W6 561 aaKnown RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 MAU2Q9Y6X3 613 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 PMF1-BGLAPU3KQ54 211 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 WDFY4Q6ZS81 3184 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 MDC1Q14676 2089 aaKnown RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 RIF1Q5UIP0 2472 aaKnown RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 SEC16AO15027 2179 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 RP1P56715 2156 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 TNRC6BQ9UPQ9 1833 aaKnown RBP4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 DNAH14Q0VDD8 3507 aa4.88□□□□□ -1.63
HMGB1P4-201ENST00000455362 PCDH15Q96QU1 1955 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 NUP214P35658 2090 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 SPTBP11277 2137 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 A0A1B0GTW7 788 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 TEX51A0A1B0GUA7 166 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 A1L4Q6 167 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 PMS2P1A4D2B8 440 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 SH3D21A4FU49 640 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 TRPC5OSA6NMA1 111 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR52A4PA6NMU1 304 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 PDZK1P1A8MUH7 402 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 MEI4A8MW99 385 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 SDHDO14521 159 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 TMPRSS11DO60235 418 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 OR4F21O95013 312 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 OTCP00480 354 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 CSF2P04141 144 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ENO1P06733 434 aaKnown RBP4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCDC159P0C7I6 412 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ERGP11308 486 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 SFTPCP11686 197 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 TNFRSF1AP19438 455 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ITIH1P19827 911 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ANXA7P20073 488 aaKnown RBP4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 MYF6P23409 242 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 DUSP1P28562 367 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 HSD17B2P37059 387 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ACTR1BP42025 376 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 CSNK1EP49674 416 aaKnown RBP4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 CCNG1P51959 295 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 FOXA1P55317 472 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 SLC37A1P57057 533 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 NXPH1P58417 271 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ACTR1AP61163 376 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 RAE1P78406 368 aaKnown RBP4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 RBPJQ06330 500 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 ILF3Q12906 894 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 IFT88Q13099 833 aa4.87□□□□□ -1.63
HMGB1P4-201ENST00000455362 TRAF3Q13114 568 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms