RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 SLC48A1Q6P1K1 146 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 CENPLQ8N0S6 344 aaPredicted RBP7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 METTL4Q8N3J2 472 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 MEIOBQ8N635 442 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 FBF1Q8TES7 1133 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 KCTD4Q8WVF5 259 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 SLC44A1Q8WWI5 657 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 CAVIN3Q969G5 261 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 KLHL29Q96CT2 875 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 COX4I2Q96KJ9 171 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 CCL19Q99731 98 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 MED18Q9BUE0 208 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 ITPAQ9BY32 194 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 SHCBP1LQ9BZQ2 653 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 DPH5Q9H2P9 285 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 NOL11Q9H8H0 719 aaKnown RBP7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 BRF2Q9HAW0 419 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 HHATLQ9HCP6 504 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 FANCFQ9NPI8 374 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 MAT2BQ9NZL9 334 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 CPSF2Q9P2I0 782 aaKnown RBP7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 DKKL1Q9UK85 242 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 SNX6Q9UNH7 406 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 MAPRE3Q9UPY8 281 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 RNF11Q9Y3C5 154 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 WIF1Q9Y5W5 379 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 ZNF469Q96JG9 3925 aaPredicted RBP7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 JMJD1CQ15652 2540 aa7.28□□□□□ -1.24
NIF3L1-209ENST00000454952 A0A096LPK6 155 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 A0A1W2PNV4 684 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SLC22A20A6NK97 555 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PLOD2O00469 737 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CTIFO43310 598 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 HCRTR2O43614 444 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SMIM24O75264 130 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 UGT2B11O75310 529 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ERAL1O75616 437 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 REM1O75628 298 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 TNFSF13O75888 250 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SMNDC1O75940 238 aaKnown RBP eCLIP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 OTCP00480 354 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ALDOAP04075 364 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 FCGR2AP12318 317 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PEPDP12955 493 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PPP3CBP16298 524 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ZNF708P17019 499 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CNTFP26441 200 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 IL12BP29460 328 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 TYK2P29597 1187 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PHBP35232 272 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CD79BP40259 229 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SLCO1A2P46721 670 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 LHX2P50458 406 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PLTPP55058 493 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 WDR4P57081 412 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 OCRLQ01968 901 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 GANABQ14697 944 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 NNATQ16517 81 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ACKR1Q16570 336 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 TSNAXIP1Q2TAA8 658 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 MROH9Q5TGP6 573 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 Q71RC1 249 aaPredicted RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 COMMD6Q7Z4G1 85 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 MILR1Q7Z6M3 343 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 YTHDF3Q7Z739 585 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CCDC25Q86WR0 208 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 KRTAP1-3Q8IUG1 177 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 GCNT2Q8N0V5 402 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PTGR2Q8N8N7 351 aaPredicted RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CNEP1R1Q8N9A8 125 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 WDSUB1Q8N9V3 476 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ADCY4Q8NFM4 1077 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 OR4K17Q8NGC6 315 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 OR52R1Q8NGF1 315 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 RDH11Q8TC12 318 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ZNF675Q8TD23 568 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CTHRC1Q96CG8 243 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SLC35A4Q96G79 324 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 FAM111AQ96PZ2 611 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 BTBD9Q96Q07 612 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 NODALQ96S42 347 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SMR3AQ99954 134 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 MRPL1Q9BYD6 325 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 GALNT9Q9HCQ5 603 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SDHAF3Q9NRP4 125 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 GIMAP4Q9NUV9 329 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 STOML1Q9UBI4 398 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 EGFL7Q9UHF1 273 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 ZNF639Q9UID6 485 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 SLC12A4Q9UP95 1085 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 PLLPQ9Y342 182 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 FN1P02751 2386 aaKnown RBP7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 CSPG4Q6UVK1 2322 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 HEATR5AQ86XA9 2040 aa7.27□□□□□ -1.25
NIF3L1-209ENST00000454952 TLN2Q9Y4G6 2542 aa7.26□□□□□ -1.25
NIF3L1-209ENST00000454952 UQCRHLA0A096LP55 91 aa7.26□□□□□ -1.25
NIF3L1-209ENST00000454952 A0A1W2PS29 197 aa7.26□□□□□ -1.25
NIF3L1-209ENST00000454952 C16orf97H3BN30 126 aa7.26□□□□□ -1.25
NIF3L1-209ENST00000454952 H7C1Q1 480 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms