RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 EXOSC6Q5RKV6 272 aaKnown RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 CGB2Q6NT52 195 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 MFSD12Q6NUT3 480 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 PAOXQ6QHF9 649 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 NUP54Q7Z3B4 507 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 SZRD1Q7Z422 152 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 FBXW8Q8N3Y1 598 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 CPSF7Q8N684 471 aaKnown RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 CDRT4Q8N9R6 151 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 OR4N2Q8NGD1 307 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 OR5M3Q8NGP4 307 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 OR9I1Q8NGQ6 314 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 TMBIM1Q969X1 311 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 MOAP1Q96BY2 351 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 ZNF317Q96PQ6 595 aaPredicted RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 SECISBP2Q96T21 854 aaKnown RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 BTNL2Q9UIR0 455 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 CNOT11Q9UKZ1 510 aaKnown RBP25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 PCDHGB4Q9UN71 923 aa25.73■■□□□ 1.71
SMARCC1-203ENST00000454240 A0A0G2JND7 137 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 TSPAN2O60636 221 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 NKX2-2O95096 273 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 HMGN2P05204 90 aaKnown RBP25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 TROVE2P10155 538 aaKnown RBP eCLIP25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 STX1BP61266 288 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 ZFP62Q8NB50 900 aaPredicted RBP25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 POGLUT1Q8NBL1 392 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 OR2M7Q8NG81 312 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 OR56A1Q8NGH5 318 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 OR4A15Q8NGL6 344 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 SPPL2AQ8TCT8 520 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 HGDQ93099 445 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 SLC35A4Q96G79 324 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 C16orf58Q96GQ5 468 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 CCDC115Q96NT0 180 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 OR52E6Q96RD3 313 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 PROK2Q9HC23 129 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 Q9N2J8 555 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 OR10H1Q9Y4A9 318 aa25.72■■□□□ 1.71
SMARCC1-203ENST00000454240 A0A0G2JMM0 328 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 A0A1W2PPB8 328 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 A0A1W2PRS3 328 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 ANKRD33BA6NCL7 494 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 OR6C70A6NIJ9 312 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 KIR3DP1A8MWS1 328 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 PRIM2P49643 509 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 ATP4BP51164 291 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 POLR2JP52435 117 aaKnown RBP25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 LRRC74AQ0VAA2 488 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 SPDYE7PQ495Y7 208 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 VPS26BQ4G0F5 336 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 GOT1L1Q8NHS2 421 aaPredicted RBP25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 NR4A3Q92570 626 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 RILPQ96NA2 401 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 SLX1AQ9BQ83 275 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 FAM173AQ9BQD7 235 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 OLAHQ9NV23 265 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 GPATCH2Q9NW75 528 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 CBLCQ9ULV8 474 aa25.71■■□□□ 1.71
SMARCC1-203ENST00000454240 FAM234BA2RU67 622 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 PINLYPA6NC86 204 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 ABCB7O75027 752 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 UGT2B11O75310 529 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 REM1O75628 298 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 CPSF4O95639 269 aaKnown RBP25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 ACP2P11117 423 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 GABRA3P34903 492 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 PIGAP37287 484 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 PNLIPRP2P54317 469 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 DESI1Q6ICB0 168 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 TMEM81Q6P7N7 255 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 SLC16A11Q8NCK7 471 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 OR5AK3PQ8NH89 298 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 NTNG2Q96CW9 530 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 COL21A1Q96P44 957 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 TMEM120AQ9BXJ8 343 aa25.7■■□□□ 1.7
SMARCC1-203ENST00000454240 G3V3Y1 287 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 SOAT1P35610 550 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 DNASE1L1P49184 302 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 RPP38P78345 283 aaKnown RBP25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 TP53BP2Q13625 1128 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 LASP1Q14847 261 aaKnown RBP25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 RNFT1Q5M7Z0 435 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 PRAMEF20Q5VT98 475 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 BHLHB9Q6PI77 547 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 FUNDC1Q8IVP5 155 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 SLC9A6Q92581 669 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 DIO2Q92813 273 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 ADOQ96SZ5 270 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 YIPF4Q9BSR8 244 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 TMEM45AQ9NWC5 275 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 GIN1Q9NXP7 522 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 TRIM33Q9UPN9 1127 aa25.69■■□□□ 1.7
SMARCC1-203ENST00000454240 UQCRC2P22695 453 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 MST1P26927 711 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 KRT20P35900 424 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 CASP3P42574 277 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 TDGF1P3P51864 188 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 FOXO1Q12778 655 aa25.68■■□□□ 1.7
SMARCC1-203ENST00000454240 SQLEQ14534 574 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms