RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 TMBIM1Q969X1 311 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 SARAFQ96BY9 339 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 ELP4Q96EB1 424 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 GNRHR2Q96P88 292 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 TSSK3Q96PN8 268 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 OSBPL11Q9BXB4 747 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 SLC6A15Q9H2J7 730 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 REEP4Q9H6H4 257 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 LDAHQ9H6V9 325 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 B4GALT7Q9UBV7 327 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 GIMAP2Q9UG22 337 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 BAIAP2L1Q9UHR4 511 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 C15orf41Q9Y2V0 281 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 FAM215AQ9Y5M1 114 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 ACTL7BQ9Y614 415 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 ITPR2Q14571 2701 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 PKDREJQ9NTG1 2253 aa13.32□□□□□ -0.28
HSPG2-207ENST00000453796 KIAA1549Q9HCM3 1950 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 SNPHO15079 494 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 TM9SF1O15321 606 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 BIRC5O15392 142 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PDPK1O15530 556 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 ITM2AO43736 263 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 ABCB7O75027 752 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 COQ9O75208 318 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 HPNP05981 417 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 BCKDHAP12694 445 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PTPN6P29350 595 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 CDK9P50750 372 aaKnown RBP13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PSPHP78330 225 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 GALNTL6Q49A17 601 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 TIGD3Q6B0B8 471 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 TMEM211Q6ICI0 200 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 ANKRD26P1Q6NSI1 321 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 SLC30A6Q6NXT4 461 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 LRIG3Q6UXM1 1119 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 ZNF551Q7Z340 670 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PACS2Q86VP3 889 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 NUDCD3Q8IVD9 361 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 CLHC1Q8NHS4 586 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 CIDECQ96AQ7 238 aaPredicted RBP13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PGM2Q96G03 612 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 METTL7AQ9H8H3 244 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 GALNT9Q9HCQ5 603 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PCDHGB3Q9Y5G1 929 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 CENPEQ02224 2701 aa13.31□□□□□ -0.28
HSPG2-207ENST00000453796 PRAMEF25A6NGN4 478 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 FIGNL2A6NMB9 653 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 GNB5O14775 395 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 AKAP10O43572 662 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 LYPLA1O75608 230 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 REM1O75628 298 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ELAVL4P26378 380 aaKnown RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ACVR2AP27037 513 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 MAP3K8P41279 467 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ASMTP46597 345 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 MASP1P48740 699 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 TRPC1P48995 793 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 PNLIPRP2P54317 469 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 NUP107P57740 925 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 CRYZQ08257 329 aaKnown RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ZNF155Q12901 538 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 C6orf136Q5SQH8 315 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 WLSQ5T9L3 541 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 SLC44A2Q8IWA5 706 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 OR1J4Q8NGS1 313 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 HOXB13Q92826 284 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 SDCCAG3Q96C92 435 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 MTERF3Q96E29 417 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 PPP3R2Q96LZ3 170 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ADOQ96SZ5 270 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 C20orf27Q9GZN8 174 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ZNF395Q9H8N7 513 aaPredicted RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 CHST11Q9NPF2 352 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 DDX18Q9NVP1 670 aaKnown RBP13.3□□□□□ -0.28
HSPG2-207ENST00000453796 NTMQ9P121 344 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 ATP6V1HQ9UI12 483 aa13.3□□□□□ -0.28
HSPG2-207ENST00000453796 WDR91A4D1P6 747 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 C2orf72A6NCS6 295 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 B4DXG7 233 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 C19orf84I3L1E1 186 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 HNRNPRO43390 633 aaKnown RBP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 WDR1O75083 606 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 PEX11AO75192 247 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 SKAP2O75563 359 aaPredicted RBP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 SERPINE1P05121 402 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 GAS1P54826 345 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 PMPCAQ10713 525 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 HSPB3Q12988 150 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 EFR3AQ14156 821 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 CHI3L2Q15782 390 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 NHSL2Q5HYW2 709 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 ZNF585AQ6P3V2 769 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 ANGPTL8Q6UXH0 198 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 LARP4Q71RC2 724 aaKnown RBP eCLIP13.29□□□□□ -0.28
HSPG2-207ENST00000453796 CROCCP2Q86T23 111 aa13.29□□□□□ -0.28
HSPG2-207ENST00000453796 WDSUB1Q8N9V3 476 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms