RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 DUSP26Q9BV47 211 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 FAM120CQ9NX05 1096 aaKnown RBP14.89□□□□□ -0.03
SNX17-204ENST00000453453 SH3BP4Q9P0V3 963 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 POU2F3Q9UKI9 436 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 FBXW2Q9UKT8 454 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 MKLN1Q9UL63 735 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 GRIP1Q9Y3R0 1128 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 PEX16Q9Y5Y5 336 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 SCN3AQ9NY46 2000 aa14.89□□□□□ -0.03
SNX17-204ENST00000453453 FITM1A5D6W6 292 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 CASC3O15234 703 aaKnown RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 GALR3O60755 368 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 KLHL18O94889 574 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 FURINP09958 794 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 HOXB9P17482 250 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 CSTF2P33240 577 aaKnown RBP eCLIP14.88□□□□□ -0.03
SNX17-204ENST00000453453 SOX11P35716 441 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 BUD31P41223 144 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 MAP2K4P45985 399 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 AVPR1BP47901 424 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 CLK1P49759 484 aaKnown RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 CLK3P49761 638 aaKnown RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 LRRC74AQ0VAA2 488 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 FAM53BQ14153 422 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 YOD1Q5VVQ6 348 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 MRM1Q6IN84 353 aaKnown RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 ERICH5Q6P6B1 374 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 CAMKMTQ7Z624 323 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 HS3ST5Q8IZT8 346 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 NATD1Q8N6N6 113 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 POC5Q8NA72 575 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 ZNF540Q8NDQ6 660 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 OR8J2Q8NGG1 315 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 NCLNQ969V3 563 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 ITCHQ96J02 903 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 BHLHE41Q9C0J9 482 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 LYRM4Q9HD34 91 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 FGF21Q9NSA1 209 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 MS4A12Q9NXJ0 267 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 SLC25A37Q9NYZ2 338 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 RPS6KA6Q9UK32 745 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 OTOGLQ3ZCN5 2332 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 DNAH14Q0VDD8 3507 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 C1orf226A1L170 272 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 GABRR3A8MPY1 467 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 EVPLLA8MZ36 301 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 TBX19O60806 448 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 RFPL3O75679 317 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 MED26O95402 600 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 B3GALT4O96024 378 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 SERPINA1P01009 418 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 APOA1P02647 267 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 FOLR1P15328 257 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 TLX1P31314 330 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 FMO3P31513 532 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 PDE7AQ13946 482 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 NDUFAF5Q5TEU4 345 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 STPG1Q5TH74 334 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 OR4F3Q6IEY1 312 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 SLITRK4Q8IW52 837 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 AMER3Q8N944 861 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 RCBTB1Q8NDN9 531 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 LILRB4Q8NHJ6 448 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 SETD6Q8TBK2 473 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 ZNF764Q96H86 408 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 CCDC32Q9BV29 185 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 SPRTNQ9H040 489 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 ENAMQ9NRM1 1142 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 TEX10Q9NXF1 929 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 EHD3Q9NZN3 535 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 AKAP7Q9P0M2 348 aaPredicted RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 MRPS2Q9Y399 296 aaKnown RBP14.88□□□□□ -0.03
SNX17-204ENST00000453453 HCN4Q9Y3Q4 1203 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 ASB4Q9Y574 426 aa14.88□□□□□ -0.03
SNX17-204ENST00000453453 WDFY4Q6ZS81 3184 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 FADS2O95864 444 aaKnown RBP14.87□□□□□ -0.03
SNX17-204ENST00000453453 SEMG1P04279 462 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 TRAPPC2P0DI81 140 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 TRAPPC2BP0DI82 140 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 NR2F6P10588 404 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 LAMP1P11279 417 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 CPN2P22792 545 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 S100A5P33763 92 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 IFITM2Q01629 132 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 MC1RQ01726 317 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.87□□□□□ -0.03
SNX17-204ENST00000453453 MAPK11Q15759 364 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 CCDC157Q569K6 752 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 STEAP3Q658P3 488 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 ZNF544Q6NX49 715 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 FAHD1Q6P587 224 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 CYP4Z1Q86W10 505 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 OR1L3Q8NH93 324 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 NUDT8Q8WV74 236 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 RASSF5Q8WWW0 418 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 MYDGFQ969H8 173 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 ZNF501Q96CX3 271 aaPredicted RBP14.87□□□□□ -0.03
SNX17-204ENST00000453453 COQ8BQ96D53 544 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 C10orf90Q96M02 699 aa14.87□□□□□ -0.03
SNX17-204ENST00000453453 MAPKAP1Q9BPZ7 522 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms