RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 NNATQ16517 81 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 PFKFB4Q16877 469 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 CCNYL2Q5T2Q4 361 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 FRG2Q64ET8 278 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 HEPHL1Q6MZM0 1159 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 GTF2H2CQ6P1K8 395 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 KLC3Q6P597 504 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF474Q6S9Z5 364 aaPredicted RBP12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 C3orf62Q6ZUJ4 267 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 KLHL7Q8IXQ5 586 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 FRG2BQ96QU4 278 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 SHCBP1LQ9BZQ2 653 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 OR10A4Q9H209 315 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 RNF122Q9H9V4 155 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 CES1P1Q9UKY3 287 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 TMCO1Q9UM00 188 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 GPR55Q9Y2T6 319 aaPredicted RBP12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 MXRA5Q9NR99 2828 aa12.91□□□□□ -0.34
LYSMD3-202ENST00000453259 DSCAMO60469 2012 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 A0A1W2PS29 197 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 PIAS1O75925 651 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 CBX7O95931 251 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 CGAP01215 116 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 GBAP04062 536 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 DPP4P27487 766 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 LOXP28300 417 aaPredicted RBP12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 STX2P32856 288 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 KIR2DL2P43627 348 aaPredicted RBP12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 KCNJ5P48544 419 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 STARP49675 285 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 EMDP50402 254 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 PNLIPRP2P54317 469 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 TRA2BP62995 288 aaKnown RBP12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 DMTNQ08495 405 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 DLG1Q12959 904 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 GGTA1PQ4G0N0 100 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 VWA1Q6PCB0 445 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 GOLGA7Q7Z5G4 137 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 BTLAQ7Z6A9 289 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 CTAGE3PQ8IX95 158 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 METTL4Q8N3J2 472 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF611Q8N823 705 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 ADCY4Q8NFM4 1077 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 RDH11Q8TC12 318 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF675Q8TD23 568 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 NTMT1Q9BV86 223 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 FAIM2Q9BWQ8 316 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 SAYSD1Q9NPB0 183 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 NMRK1Q9NWW6 199 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 WHRNQ9P202 907 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 PLLPQ9Y342 182 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 RNF11Q9Y3C5 154 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 ZNF780BQ9Y6R6 833 aa12.9□□□□□ -0.34
LYSMD3-202ENST00000453259 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 ZIC3O60481 467 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 REM1O75628 298 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 SOX30O94993 753 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 KLK1P06870 262 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 TBXA2RP21731 343 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 GRK2P25098 689 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 GPX6P59796 221 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 IFT88Q13099 833 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 GUSBP1Q15486 140 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 PODNL1Q6PEZ8 512 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 FAM214BQ7L5A3 538 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 CMC1Q7Z7K0 106 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 CENPLQ8N0S6 344 aaPredicted RBP12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 OR52R1Q8NGF1 315 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 GFM2Q969S9 779 aaKnown RBP12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 TMBIM1Q969X1 311 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 HS3ST6Q96QI5 342 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 TRIM31Q9BZY9 425 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 BRF2Q9HAW0 419 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 HHATLQ9HCP6 504 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 SDHAF3Q9NRP4 125 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 STOML1Q9UBI4 398 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 RNF14Q9UBS8 474 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 FBXL2Q9UKC9 423 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 PROCRQ9UNN8 238 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 ABCG2Q9UNQ0 655 aa12.89□□□□□ -0.35
LYSMD3-202ENST00000453259 CHD3Q12873 2000 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 C2orf72A6NCS6 295 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 TLX2O43763 284 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 TSPAN2O60636 221 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 IL12BP29460 328 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 NEK2P51955 445 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 B3GALT5-AS1P59052 145 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 RPS3AP61247 264 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 EXOSC7Q15024 291 aaKnown RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 ERCC6LQ2NKX8 1250 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 GLYR1Q49A26 553 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 FAM111BQ6SJ93 734 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 ZNF704Q6ZNC4 412 aaPredicted RBP12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 CREG2Q8IUH2 290 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 OR4K17Q8NGC6 315 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 ATP6V1E2Q96A05 226 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 NXNL1Q96CM4 212 aa12.88□□□□□ -0.35
LYSMD3-202ENST00000453259 KLHL29Q96CT2 875 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms