RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 OR10H1Q9Y4A9 318 aa13.95□□□□□ -0.18
CHD3-205ENST00000449744 HSPB2A8KAH6 182 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 AZIN1O14977 448 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 NME6O75414 186 aaPredicted RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 CBR3O75828 277 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 NUDT17P0C025 328 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 CT45A8P0DMV1 189 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 CT45A9P0DMV2 189 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 PTGDSP41222 190 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 CORO7P57737 925 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 VSNL1P62760 191 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 MRPS22P82650 360 aaKnown RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 TFF3Q07654 80 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 PCLAFQ15004 111 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 HSPB2Q16082 182 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 SLC25A35Q3KQZ1 300 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 ACSF3Q4G176 576 aaPredicted RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 CT45A2Q5DJT8 189 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 SH2D4BQ5SQS7 431 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 VASNQ6EMK4 673 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 LARP4Q71RC2 724 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHD3-205ENST00000449744 YRDCQ86U90 279 aaKnown RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 SLC44A2Q8IWA5 706 aaPredicted RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 HOMEZQ8IX15 550 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 FAM83FQ8NEG4 500 aaPredicted RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHD3-205ENST00000449744 ABTB1Q969K4 478 aaPredicted RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 TREX2Q9BQ50 279 aaPredicted RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 LRTM1Q9HBL6 345 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 SLC24A3Q9HC58 644 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 SERHLQ9NQF3 203 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 C1orf109Q9NX04 203 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 MKS1Q9NXB0 559 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 TAS2R7Q9NYW3 318 aa13.94□□□□□ -0.18
CHD3-205ENST00000449744 EXO1Q9UQ84 846 aaKnown RBP13.94□□□□□ -0.18
CHD3-205ENST00000449744 A0A087WV62 115 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 TSPAN2O60636 221 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 EPPINO95925 133 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 ACTL6AO96019 429 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 NEFHP12036 1026 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 IGFBP2P18065 325 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 BMP7P18075 431 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 PRPH2P23942 346 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 MC3RP41968 323 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 PNLIPRP2P54317 469 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 PRSS53Q2L4Q9 553 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 NHSL2Q5HYW2 709 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 TMEM107Q6UX40 140 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 NPSR1Q6W5P4 371 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 TRABD2AQ86V40 505 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 LACC1Q8IV20 430 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 LIX1LQ8IVB5 337 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 DMRTC2Q8IXT2 367 aaPredicted RBP13.93□□□□□ -0.18
CHD3-205ENST00000449744 BANPQ8N9N5 519 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 OR14L1PQ8NHC6 308 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 NTNG2Q96CW9 530 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 UGT2B28Q9BY64 529 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 PRDM14Q9GZV8 571 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 GLIPR2Q9H4G4 154 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 MCCC2Q9HCC0 563 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 DDX18Q9NVP1 670 aaKnown RBP13.93□□□□□ -0.18
CHD3-205ENST00000449744 CCL27Q9Y4X3 112 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 WIF1Q9Y5W5 379 aa13.93□□□□□ -0.18
CHD3-205ENST00000449744 DVL2O14641 736 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 IL2RAP01589 272 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 FREM3P0C091 2139 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 CAPN3P20807 821 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 ALDH3A1P30838 453 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 GPC1P35052 558 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 MYBPHQ13203 477 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 RCAN2Q14206 197 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 KIAA0040Q15053 153 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 ZNHIT3Q15649 155 aaPredicted RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 EMBQ6PCB8 327 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 PLCZ1Q86YW0 608 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 WDSUB1Q8N9V3 476 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 GFM2Q969S9 779 aaKnown RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 EFHD2Q96C19 240 aaPredicted RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 LRRC46Q96FV0 321 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 EGLN2Q96KS0 407 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 FAM111AQ96PZ2 611 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 TRIB1Q96RU8 372 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 ZNF559Q9BR84 538 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 ROPN1BQ9BZX4 212 aaPredicted RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 ROPN1Q9HAT0 212 aaPredicted RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 EML4Q9HC35 981 aaKnown RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 MRTO4Q9UKD2 239 aaKnown RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 C19orf53Q9UNZ5 99 aaPredicted RBP13.92□□□□□ -0.18
CHD3-205ENST00000449744 PTGDR2Q9Y5Y4 395 aa13.92□□□□□ -0.18
CHD3-205ENST00000449744 HCFC1P51610 2035 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 TEP1Q99973 2627 aaKnown RBP13.91□□□□□ -0.18
CHD3-205ENST00000449744 NPIPB8E9PQR5 432 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 UPK1AO00322 258 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 PLOD2O00469 737 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 PDPK1O15530 556 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 NPHS1O60500 1241 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 SPAG7O75391 227 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 LINC00032P0C843 101 aa13.91□□□□□ -0.18
CHD3-205ENST00000449744 TACR1P25103 407 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms