RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 COQ5Q5HYK3 327 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SPANXN2Q5MJ10 180 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 AVPI1Q5T686 147 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM69AQ5T7M9 428 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SAXO2Q658L1 398 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANKS6Q68DC2 871 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 KIAA1161Q6NSJ0 714 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRNIPQ6NTE8 343 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM199XQ6PEV8 388 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 UQCC3Q6UW78 93 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC24A5Q71RS6 500 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRMT11Q7Z4G4 463 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 P4HA3Q7Z4N8 544 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 DPPA2Q7Z7J5 298 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 RBM23Q86U06 439 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZC3HC1Q86WB0 502 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FAM131BQ86XD5 332 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ANGPTL5Q86XS5 388 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FUNDC1Q8IVP5 155 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MISPQ8IVT2 679 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ADHFE1Q8IWW8 467 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 DDIASQ8IXT1 998 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 KATNAL2Q8IYT4 538 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRSS35Q8N3Z0 413 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SYT14Q8NB59 555 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR10A7Q8NGE5 316 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 OR14K1Q8NGZ2 314 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SPATA22Q8NHS9 363 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 HMGCLL1Q8TB92 370 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 WDR20Q8TBZ3 569 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 RDH11Q8TC12 318 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CD99L2Q8TCZ2 262 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAPK15Q8TD08 544 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF431Q8TF32 576 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TNFRSF14Q92956 283 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 UCN3Q969E3 161 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SLC35C1Q96A29 364 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 CREB3L1Q96BA8 519 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ROPN1LQ96C74 230 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 DNAJC19Q96DA6 116 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MALSU1Q96EH3 234 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ZNF354BQ96LW1 612 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FCRL4Q96PJ5 515 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TRNT1Q96Q11 434 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PFDN5Q99471 154 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 LGMNQ99538 433 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MAP3K3Q99759 626 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 WDR77Q9BQA1 342 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SPATA25Q9BR10 227 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MECRQ9BV79 373 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ERVK-6Q9BXR3 956 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NFKBIZQ9BYH8 718 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 POTEKPQ9BYX7 375 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ACTR6Q9GZN1 396 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SIK2Q9H0K1 926 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 UPF3AQ9H1J1 476 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NXF3Q9H4D5 531 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ELOVL6Q9H5J4 265 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PPP1R3EQ9H7J1 279 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 METTL8Q9H825 291 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 EVA1AQ9H8M9 152 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 FOLH1BQ9HBA9 442 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 BARX1Q9HBU1 254 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 GCM1Q9NP62 436 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ACOT13Q9NPJ3 140 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMLHEQ9NVH6 421 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PRMT7Q9NVM4 692 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MRPS18AQ9NVS2 196 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 RBFOX1Q9NWB1 397 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SMPD4Q9NXE4 827 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 AKAP7Q9P0M2 348 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 COX16Q9P0S2 106 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NCDNQ9UBB6 729 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 WARS2Q9UGM6 360 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 IL19Q9UHD0 177 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 MUTYHQ9UIF7 546 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NOCTQ9UK39 431 aaKnown RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 ADAM29Q9UKF5 820 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 POMT2Q9UKY4 750 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 NCKAP1Q9Y2A7 1128 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 TMEM184BQ9Y519 407 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 SBF2Q86WG5 1849 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 A0A0G2JMZ2 1700 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 LRRC37A2A6NM11 1700 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 LRRC37AA6NMS7 1700 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 PHLPP1O60346 1717 aa3.41□□□□□ -1.86
HMGB3P8-201ENST00000449709 KIAA1217Q5T5P2 1943 aa3.4□□□□□ -1.86
HMGB3P8-201ENST00000449709 LOXHD1Q8IVV2 1947 aa3.4□□□□□ -1.86
HMGB3P8-201ENST00000449709 A0A087X0M5 115 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CCDC187A0A096LP49 1063 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 A0A1B0GX30 115 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 UBE2QL1A1L167 161 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 PI4KAP2A4QPH2 592 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDHR4A6H8M9 788 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 FAM159BA6NKW6 160 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 AQP7P3A6NL99 342 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 ERI2A8K979 691 aaKnown RBP3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 B5MCH6 92 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 WASH3PC4AMC7 463 aa3.4□□□□□ -1.87
HMGB3P8-201ENST00000449709 D6RAR5 112 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms