RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SOCS6O14544 535 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ARHGEF15O94989 841 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 NPIPA8P0DM63 369 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 PSMB5P28074 263 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 PSMB10P40306 273 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ERVK-25P63136 954 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ST3GAL3Q11203 375 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 GPR176Q14439 515 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 NNATQ16517 81 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 ARHGAP15Q53QZ3 475 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 C18orf63Q68DL7 685 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FAAP20Q6NZ36 180 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FAHD1Q6P587 224 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 RSPO2Q6UXX9 243 aaPredicted RBP11.72□□□□□ -0.53
UBE3B-204ENST00000449510 LIMS2Q7Z4I7 341 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 TOR1AIP2Q8NFQ8 470 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 OR4M1Q8NGD0 313 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 WDR20Q8TBZ3 569 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 KCNN1Q92952 543 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 SLC25A46Q96AG3 418 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 RNF31Q96EP0 1072 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 DDOQ99489 341 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 P2RY12Q9H244 342 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
UBE3B-204ENST00000449510 LRRN3E7EW58 273 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 GRM6O15303 877 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 FLRT2O43155 660 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 MRPS14O60783 128 aaKnown RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF623O75123 536 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 GKN3PP0CG01 181 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF865P0CJ78 1059 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 HSD3B1P14060 373 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 PTPN2P17706 415 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ELK1P19419 428 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 GDI2P50395 445 aaKnown RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 AKR1C2P52895 323 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 CLDN2P57739 230 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 AKR1C1Q04828 323 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 SEC23BQ15437 767 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 TAF13Q15543 124 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 HSD11B1LQ7Z5J1 315 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 SERINC5Q86VE9 423 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF480Q8WV37 535 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 PDLIM5Q96HC4 596 aaKnown RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF471Q9BX82 626 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 LRRN3Q9H3W5 708 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 TCF7L1Q9HCS4 588 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 SLC39A1Q9NY26 324 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 PLEKHA6Q9Y2H5 1048 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 EXOSC1Q9Y3B2 195 aaKnown RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 NDUFS4O43181 175 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 SLC2A10O95528 541 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF8P17098 575 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 OR10A3P58181 314 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 UBE2MP61081 183 aaKnown RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZNF234Q14588 700 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 KIAA0040Q15053 153 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 XKR4Q5GH76 650 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 SLX4IPQ5VYV7 408 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZCCHC12Q6PEW1 402 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 NUDT13Q86X67 352 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 COMMD2Q86X83 199 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 GRAMD2AQ8IUY3 354 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 GPR135Q8IZ08 494 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 OR8J2Q8NGG1 315 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 OR6T1Q8NGN1 323 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 CASTOR1Q8WTX7 329 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 ZFPM2Q8WW38 1151 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 TMEM185BQ9H7F4 350 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 CD93Q9NPY3 652 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 USP36Q9P275 1121 aaKnown RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 LHX3Q9UBR4 397 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 MBD1Q9UIS9 605 aaPredicted RBP11.71□□□□□ -0.53
UBE3B-204ENST00000449510 RCE1Q9Y256 329 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 KCNK6Q9Y257 313 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 NTNG1Q9Y2I2 539 aa11.71□□□□□ -0.53
UBE3B-204ENST00000449510 A0A0A6YYJ9 748 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 H7C2Y5 167 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 PRODHO43272 600 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 C1QBP02746 253 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 MMP11P24347 488 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 PRR5P85299 388 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 GNA13Q14344 377 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 CLPPQ16740 277 aaPredicted RBP11.71□□□□□ -0.54
UBE3B-204ENST00000449510 CHST4Q8NCG5 386 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 OR9A1PQ8NGU1 263 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 TIFAQ96CG3 184 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.54
UBE3B-204ENST00000449510 CD180Q99467 661 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 ALG8Q9BVK2 526 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 ATP13A2Q9NQ11 1180 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 PADI2Q9Y2J8 665 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 WNT6Q9Y6F9 365 aa11.71□□□□□ -0.54
UBE3B-204ENST00000449510 RTTNQ86VV8 2226 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 KLK8O60259 260 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 CEBPGP53567 150 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 PFN3P60673 137 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 HYAL2Q12891 473 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 SYT14P1Q58G82 188 aa11.7□□□□□ -0.54
UBE3B-204ENST00000449510 Q5BKY6 102 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms