RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SUSD1Q6UWL2 747 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 CASP12Q6UXS9 341 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZER1Q7Z7L7 766 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 LGI4Q8N135 537 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 L3MBTL4Q8NA19 623 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF251Q9BRH9 671 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 DNTTIP1Q9H147 329 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 NDUFB11Q9NX14 153 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 POMT2Q9UKY4 750 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 CXorf51AA0A1B0GTR3 108 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 SMAD6O43541 496 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 ATG12O94817 140 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 SDC1P18827 310 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 PPM1AP35813 382 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 CSNK1DP48730 415 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 MAZP56270 477 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 PLA1AQ53H76 456 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 VASNQ6EMK4 673 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 HIST2H2AA3Q6FI13 130 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 PYHIN1Q6K0P9 492 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 SFT2D1Q8WV19 159 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF285Q96NJ3 590 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 TREX2Q9BQ50 279 aaPredicted RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 NIT2Q9NQR4 276 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 PRDM9Q9NQV7 894 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 LSM7Q9UK45 103 aaKnown RBP12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 FZD4Q9ULV1 537 aa12.72□□□□□ -0.37
SYNGAP1-204ENST00000449372 TTLL8A6PVC2 850 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 CSO75390 466 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 LRATO95237 230 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 RLN2P04090 185 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 POU3F2P20265 443 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 PREPP48147 710 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 GZMMP51124 257 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 CTBP2P56545 445 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 TSPAN5P62079 268 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 PPIGQ13427 754 aaKnown RBP eCLIP12.71□□□□□ -0.372e-7■■■■□ 22.3
SYNGAP1-204ENST00000449372 SPIN4Q56A73 249 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 FAM198BQ6UWH4 519 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF730Q6ZMV8 503 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 NXPE1Q8N323 547 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 OXR1Q8N573 874 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 C1orf52Q8N6N3 182 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR1M1Q8NGA1 313 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 NKX6-2Q9C056 277 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 GPR160Q9UJ42 338 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 GSTK1Q9Y2Q3 226 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 CHD9Q3L8U1 2897 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 IQCF5A8MTL0 148 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 GPR171O14626 319 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 TAPBPO15533 448 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ACAA1P09110 424 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ACRP10323 421 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 PXNP49023 591 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF630Q2M218 657 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ALKAL2Q6UX46 152 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ZNF454Q8N9F8 522 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ARMC5Q96C12 935 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 KCTD7Q96MP8 289 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 OR2M2Q96R28 347 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 KATNB1Q9BVA0 655 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC12A9Q9BXP2 914 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 ABCG5Q9H222 651 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 C11orf49Q9H6J7 331 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 EVA1AQ9H8M9 152 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 SLC6A5Q9Y345 797 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 RPL36Q9Y3U8 105 aaKnown RBP12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 PCDHGA2Q9Y5H1 932 aa12.71□□□□□ -0.37
SYNGAP1-204ENST00000449372 MEIKINA0A087WXM9 373 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 TPST2O60704 377 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 HTR3BO95264 441 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 ACADLP28330 430 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 GABRR2P28476 465 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 EVX1P49640 407 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 PLEKHS1Q5SXH7 462 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 ATXN7L2Q5T6C5 722 aaPredicted RBP12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 FCRLBQ6BAA4 426 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 TRMT11Q7Z4G4 463 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 UXS1Q8NBZ7 420 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 PAWRQ96IZ0 340 aaKnown RBP12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 INPP5KQ9BT40 448 aa12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 GPN3Q9UHW5 284 aaPredicted RBP12.71□□□□□ -0.38
SYNGAP1-204ENST00000449372 TEX13CA0A0J9YWL9 993 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 PMS2P1A4D2B8 440 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 RASGRP1O95267 797 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 CATP04040 527 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 IFNA4P05014 189 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 AMD1P17707 334 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 GDF5P43026 501 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 CHIT1Q13231 466 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 HFEQ30201 348 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 GPRC6AQ5T6X5 926 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 MCATQ8IVS2 390 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 NPAS3Q8IXF0 933 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 SLC5A8Q8N695 610 aa12.7□□□□□ -0.38
SYNGAP1-204ENST00000449372 OR52P1PQ8NH57 321 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms