RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 EMDP50402 254 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 FBXW4P57775 412 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 RPP38P78345 283 aaKnown RBP13.39□□□□□ -0.27
USP39-206ENST00000448971 PDE7AQ13946 482 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 NTRK2Q16620 822 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 ZNF551Q7Z340 670 aaPredicted RBP13.39□□□□□ -0.27
USP39-206ENST00000448971 GHDCQ8N2G8 530 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 DIO2Q92813 273 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 MTERF3Q96E29 417 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 OMA1Q96E52 524 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 DOHHQ9BU89 302 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 TTTY12Q9BZ98 90 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 MANSC1Q9H8J5 431 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 FOLH1BQ9HBA9 442 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 PNPOQ9NVS9 261 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 SUCOQ9UBS9 1254 aaKnown RBP13.39□□□□□ -0.27
USP39-206ENST00000448971 SH3BGRL2Q9UJC5 107 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 HAO1Q9UJM8 370 aa13.39□□□□□ -0.27
USP39-206ENST00000448971 BOKQ9UMX3 212 aaPredicted RBP13.39□□□□□ -0.27
USP39-206ENST00000448971 CHCHD2Q9Y6H1 151 aaPredicted RBP13.39□□□□□ -0.27
USP39-206ENST00000448971 A0A087WV62 115 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 TBX19O60806 448 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 NME6O75414 186 aaPredicted RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 SNRPB2P08579 225 aaKnown RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 KITP10721 976 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 G6PDP11413 515 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 PPICP45877 212 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 MANFP55145 182 aaKnown RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 HSF1Q00613 529 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 ZNHIT3Q15649 155 aaPredicted RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.38□□□□□ -0.27
USP39-206ENST00000448971 KRTCAP3Q53RY4 240 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 XKRXQ6PP77 449 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 SLC22A16Q86VW1 577 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 SIAH3Q8IW03 269 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 OR7A2PQ8NGA2 310 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 DYDC1Q8WWB3 177 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 ZNF597Q96LX8 424 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 JSRP1Q96MG2 331 aaPredicted RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 VSTM2LQ96N03 204 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 BTBD9Q96Q07 612 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 ACBD3Q9H3P7 528 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 METTL7AQ9H8H3 244 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 AKTIPQ9H8T0 292 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 ATAD3AQ9NVI7 634 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 TUBA8Q9NY65 449 aaPredicted RBP13.38□□□□□ -0.27
USP39-206ENST00000448971 CNIH4Q9P003 139 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 OR10H1Q9Y4A9 318 aa13.38□□□□□ -0.27
USP39-206ENST00000448971 UPK1AO00322 258 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 PLOD2O00469 737 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 ASNA1O43681 348 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 SNNO75324 88 aaPredicted RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 PPM1BO75688 479 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 COX6B1P14854 86 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 ABOP16442 354 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 LBPP18428 481 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 PRPS1L1P21108 318 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 DRD5P21918 477 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 IL12BP29460 328 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 MASP1P48740 699 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 CDK9P50750 372 aaKnown RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 CASP6P55212 293 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 CORO7P57737 925 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 PPIAP62937 165 aaKnown RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 ADORA2A-AS1P86434 159 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 EMX2Q04743 252 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 TESK1Q15569 626 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 SMU1Q2TAY7 513 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 TBCELQ5QJ74 424 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 MTFR2Q6P444 385 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 RPTNQ6XPR3 784 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 SLC44A2Q8IWA5 706 aaPredicted RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 OR2L13Q8N349 312 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 SPPL2AQ8TCT8 520 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 ELP4Q96EB1 424 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 PRPF18Q99633 342 aaKnown RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 SH3GL2Q99962 352 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 MEAF6Q9HAF1 191 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 IL1RL2Q9HB29 575 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 SH2D2AQ9NP31 389 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 EQTNQ9NQ60 294 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 ASIC5Q9NY37 505 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 B4GALT7Q9UBV7 327 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 ATP6V1HQ9UI12 483 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 CNOT11Q9UKZ1 510 aaKnown RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 C19orf53Q9UNZ5 99 aaPredicted RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.37□□□□□ -0.27
USP39-206ENST00000448971 NAV3Q8IVL0 2385 aa13.37□□□□□ -0.27
USP39-206ENST00000448971 TRPC5OSA6NMA1 111 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 HDAC3O15379 428 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 SLC19A2O60779 497 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 REM1O75628 298 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 AGAP20933 346 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 PRKAG1P54619 331 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 PSPHP78330 225 aa13.36□□□□□ -0.27
USP39-206ENST00000448971 OCRLQ01968 901 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms