RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 ASMTP46597 345 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 MASP1P48740 699 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 SMSP52788 366 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 PSG6Q00889 435 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ART3Q13508 389 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 PDE7AQ13946 482 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 CDSNQ15517 529 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ATP6AP1LQ52LC2 224 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF787Q6DD87 383 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 TMEM81Q6P7N7 255 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 OR2L13Q8N349 312 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 LIX1Q8N485 282 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 MARVELD2Q8N4S9 558 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF781Q8N8C0 355 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 OR5M9Q8NGP3 310 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 PHF10Q8WUB8 498 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 TMEM41AQ96HV5 264 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ZNF597Q96LX8 424 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 COL21A1Q96P44 957 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC6A15Q9H2J7 730 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 TP63Q9H3D4 680 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 EXO5Q9H790 373 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 METTL7AQ9H8H3 244 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 PNPLA3Q9NST1 481 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 QPCTLQ9NXS2 382 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 SPRR3Q9UBC9 169 aa11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.66□□□□□ -0.54
PRPF40A-203ENST00000448428 NUP214P35658 2090 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 PRSS44E7EML9 344 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 GNB5O14775 395 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 BCKDKO14874 412 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 PDPK1O15530 556 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 COQ9O75208 318 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 TRAPPC6AO75865 159 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 PSMG1O95456 288 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 AGAP20933 346 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 ENDOUP21128 410 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 GRK2P25098 689 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 GDF1P27539 372 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 MAPK1P28482 360 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 FRKP42685 505 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC1A6P48664 564 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 TRPC1P48995 793 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 MANFP55145 182 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 HSPB3Q12988 150 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 STX3Q13277 289 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 SNTA1Q13424 505 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 IL23RQ5VWK5 629 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 TIGD3Q6B0B8 471 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 SP5Q6BEB4 398 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC30A6Q6NXT4 461 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 ANGPTL8Q6UXH0 198 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 WDR53Q7Z5U6 358 aaPredicted RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 EID3Q8N140 333 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 RPRMLQ8N4K4 120 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 TUBGCP3Q96CW5 907 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 TMCO6Q96DC7 493 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 MTERF3Q96E29 417 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 SLC35A4Q96G79 324 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 SORT1Q99523 831 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 PAIP2Q9BPZ3 127 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 C1orf50Q9BV19 199 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 UBQLN3Q9H347 655 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 GALNT9Q9HCQ5 603 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 DDX18Q9NVP1 670 aaKnown RBP11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 B4GALT7Q9UBV7 327 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 ATP6V1HQ9UI12 483 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 ACAD8Q9UKU7 415 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 C15orf41Q9Y2V0 281 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
PRPF40A-203ENST00000448428 ARHGAP21Q5T5U3 1957 aa11.65□□□□□ -0.55
PRPF40A-203ENST00000448428 PCNX3Q9H6A9 2034 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 TMEM120BA0PK00 339 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 PRAMEF25A6NGN4 478 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 ABCB7O75027 752 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 HPNP05981 417 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 IFI6P09912 130 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 PRPS2P11908 318 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 EFNA1P20827 205 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 GRNP28799 593 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 CDK9P50750 372 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 RPL14P50914 215 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 PNLIPRP2P54317 469 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 WDR4P57081 412 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 PSPHP78330 225 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 ZNF155Q12901 538 aaPredicted RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 GAB1Q13480 694 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 PTGR1Q14914 329 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 CYP27C1Q4G0S4 372 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 HHATQ5VTY9 493 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 TMEM211Q6ICI0 200 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 ZNF585AQ6P3V2 769 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 LARP4Q71RC2 724 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 R3HCC1LQ7Z5L2 792 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 ANKRD42Q8N9B4 389 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 WDSUB1Q8N9V3 476 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 FNDC5Q8NAU1 212 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 OR7A2PQ8NGA2 310 aa11.64□□□□□ -0.55
PRPF40A-203ENST00000448428 OR1J4Q8NGS1 313 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms