RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 ZNF613Q6PF04 617 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 NUDT18Q6ZVK8 323 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MITD1Q8WV92 249 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 GTPBP3Q969Y2 492 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 TMEM125Q96AQ2 219 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 LRIG1Q96JA1 1093 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 RPL10LQ96L21 214 aaKnown RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 MRGPRX4Q96LA9 322 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 BEX2Q9BXY8 128 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 OR8D2Q9GZM6 311 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 MMP26Q9NRE1 261 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 TEX10Q9NXF1 929 aaPredicted RBP2.78□□□□□ -1.96
CHD9-203ENST00000447540 PCDHA10Q9Y5I2 948 aa2.78□□□□□ -1.96
CHD9-203ENST00000447540 UBR1Q8IWV7 1749 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 NME4O00746 187 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 SEC22BO75396 215 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 CREG1O75629 220 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 RPLP1P05386 114 aaKnown RBP2.78□□□□□ -1.97
CHD9-203ENST00000447540 CST2P09228 141 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 ALDOCP09972 364 aaKnown RBP2.78□□□□□ -1.97
CHD9-203ENST00000447540 MMP15P51511 669 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 NUBP1P53384 320 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 WNT4P56705 351 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 BACE1P56817 501 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 IFITM3Q01628 133 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 ACOT6Q3I5F7 207 aaPredicted RBP2.78□□□□□ -1.97
CHD9-203ENST00000447540 FAM162BQ5T6X4 162 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 OR5M10Q6IEU7 315 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 RABEPKQ7Z6M1 372 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 NLGN4XQ8N0W4 816 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 AQP11Q8NBQ7 271 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 NLGN4YQ8NFZ3 816 aaPredicted RBP2.78□□□□□ -1.97
CHD9-203ENST00000447540 NEIL3Q8TAT5 605 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 SEMA4DQ92854 862 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 MTFMTQ96DP5 389 aaKnown RBP2.78□□□□□ -1.97
CHD9-203ENST00000447540 ACY3Q96HD9 319 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 THAP7Q9BT49 309 aaPredicted RBP2.78□□□□□ -1.97
CHD9-203ENST00000447540 OR11A1Q9GZK7 315 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 KCMF1Q9P0J7 381 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 SLC22A7Q9Y694 548 aa2.78□□□□□ -1.97
CHD9-203ENST00000447540 XYLBO75191 536 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 JTBO76095 146 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 URODP06132 367 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 MAKP20794 623 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ACVR2AP27037 513 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 HOXC9P31274 260 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 CASRP41180 1078 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 PJVKQ0ZLH3 352 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 KIAA0141Q14154 515 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 SIM2Q14190 667 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 TMEM241Q24JQ0 296 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TMEM35AQ53FP2 167 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 CYB5R2Q6BCY4 276 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 GDPD4Q6W3E5 623 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZPBP2Q6X784 338 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 KIAA0319LQ8IZA0 1049 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF567Q8N184 647 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF610Q8N9Z0 462 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SYT17Q9BSW7 474 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NAA50Q9GZZ1 169 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 CPVLQ9H3G5 476 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 THSD1Q9NS62 852 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZSCAN32Q9NX65 697 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NCDNQ9UBB6 729 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 GDF2Q9UK05 429 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 LRFN2Q9ULH4 789 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SLC6A14Q9UN76 642 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SRPK3Q9UPE1 567 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 RPH3AQ9Y2J0 694 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 CREBBPQ92793 2442 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TGIF2-C20orf24A0A0A6YYL0 155 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 GXYLT2A0PJZ3 443 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SYNDIG1LA6NDD5 238 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 A8MUA0 341 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ALG1L2C9J202 215 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NKRFO15226 690 aaKnown RBP eCLIP2.77□□□□□ -1.971e-6■■□□□ 11.6
CHD9-203ENST00000447540 MED6O75586 246 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF432O94892 652 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TIMP2P16035 220 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF37AP17032 561 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 GABRB1P18505 474 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 HOXA9P31269 272 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TNFSF10P50591 281 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SMSP52788 366 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 CYP24A1Q07973 514 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SLC10A7Q0GE19 358 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 RBMS2Q15434 407 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 MANEALQ5VSG8 457 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NKAIN2Q5VXU1 208 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 FBXO31Q5XUX0 539 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 NSUN5P2Q63ZY6 315 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 CHST15Q7LFX5 561 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 ABHD12BQ7Z5M8 362 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 METTL23Q86XA0 190 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 MISPQ8IVT2 679 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NEK7Q8TDX7 302 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 RNF170Q96K19 258 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 FOXN4Q96NZ1 517 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 OR5B2Q96R09 309 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TRIB3Q96RU7 358 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms