RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RBMY1FQ15415 496 aaKnown RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 BCL7AQ4VC05 210 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 TOR1AIP1Q5JTV8 583 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 MARC1Q5VT66 337 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 AP1ARQ63HQ0 302 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 KLHL10Q6JEL2 608 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 RNF44Q7L0R7 432 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 P4HA3Q7Z4N8 544 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 YRDCQ86U90 279 aaKnown RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 IQCF2Q8IXL9 164 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 GPALPP1Q8IXQ4 340 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF540Q8NDQ6 660 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 OR4F5Q8NH21 305 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 NANPQ8TBE9 248 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 ARRDC2Q8TBH0 407 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 C17orf50Q8WW18 174 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 SYN2Q92777 582 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 PMM1Q92871 262 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 ZUFSPQ96AP4 578 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 S100PBPQ96BU1 408 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 PAGE5Q96GU1 130 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 LINC00615Q96LM1 132 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 UBE2TQ9NPD8 197 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 ADAM22Q9P0K1 906 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 DNAJC12Q9UKB3 198 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 BOKQ9UMX3 212 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 PROCRQ9UNN8 238 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF711Q9Y462 761 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 JRKLQ9Y4A0 524 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 TTLL3Q9Y4R7 772 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.31□□□□□ -1.72
SDCBP-205ENST00000447267 COMMD10Q9Y6G5 202 aa4.31□□□□□ -1.72
SDCBP-205ENST00000447267 WNK2Q9Y3S1 2297 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 TRGV11A0A075B6L2 103 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 A0A1W2PS29 197 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 LRRD1A4D1F6 860 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF860A6NHJ4 632 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 TARM1B6A8C7 271 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 EEF2KO00418 725 aaKnown RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 P4HA2O15460 535 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 KIF5CO60282 957 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 RDH16O75452 317 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 JTBO76095 146 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 MYO1DO94832 1006 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 SLU7O95391 586 aaKnown RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 C1QAP02745 245 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 FHP07954 510 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 PNMA6AP0CW24 399 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 CYP11B1P15538 503 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 MAOAP21397 527 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 PKLRP30613 574 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 CDK9P50750 372 aaKnown RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 DPYSQ14117 519 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 TAB1Q15750 504 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 NHSL2Q5HYW2 709 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 SLC22A10Q63ZE4 541 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 TTC19Q6DKK2 380 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 CCDC70Q6NSX1 233 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 B3GLCTQ6Y288 498 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 RFX8Q6ZV50 586 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 MICALCLQ6ZW33 695 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 RNF144BQ7Z419 303 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 BBS5Q8N3I7 341 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 TMEM35BQ8NCS4 154 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 OR5T3Q8NGG3 340 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 SLC30A5Q8TAD4 765 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 ATL1Q8WXF7 558 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 FIG4Q92562 907 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 JADE3Q92613 823 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 DPF1Q92782 380 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 NCLNQ969V3 563 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 DHRS9Q9BPW9 319 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 ZMAT3Q9HA38 289 aaKnown RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 TREM2Q9NZC2 230 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 C1RLQ9NZP8 487 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 ZNF69Q9UC07 566 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 ARMCX3Q9UH62 379 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-205ENST00000447267 BLOC1S6Q9UL45 172 aa4.3□□□□□ -1.72
SDCBP-205ENST00000447267 EXPH5Q8NEV8 1989 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 TMCO5BA8MYB1 307 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 LYNX1G3V0Z9 82 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 PLOD2O00469 737 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 ABCD4O14678 606 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 WNT9BO14905 357 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 EMC8O43402 210 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 ZFAND5O76080 213 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 HAUS5O94927 633 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 SNUPNO95149 360 aaKnown RBP4.29□□□□□ -1.72
SDCBP-205ENST00000447267 HPNP05981 417 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 CRHP06850 196 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 LYNX1P0DP58 116 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 CPN1P15169 458 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 IGLL1P15814 213 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 PGCP20142 388 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 CD9P21926 228 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 ACADLP28330 430 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 PTPRCAPQ14761 206 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 NAA25Q14CX7 972 aa4.29□□□□□ -1.72
SDCBP-205ENST00000447267 C3orf36Q3SXR2 165 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms