RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 GSTT2BP0CG30 244 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 RPS5P46782 204 aaKnown RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 LSSP48449 732 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 AP3S2P59780 193 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 COX20Q5RI15 118 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 C10orf62Q5T681 223 aaPredicted RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 RAB12Q6IQ22 244 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 C9orf43Q8TAL5 461 aaPredicted RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 PCNPQ8WW12 178 aaKnown RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 MKS1Q9NXB0 559 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 TEX10Q9NXF1 929 aaPredicted RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 KLHL9Q9P2J3 617 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 DCDC2BA2VCK2 349 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 PBX2P40425 430 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 RASGEF1BQ0VAM2 473 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 ACOT4Q8N9L9 421 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 CCNL2Q96S94 520 aaPredicted RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 PITX2Q99697 317 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 ZNF700Q9H0M5 742 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 EXOSC1Q9Y3B2 195 aaKnown RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 PRSS38A1L453 326 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 AGR2O95994 175 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 ACPPP15309 386 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 MAGEA6P43360 314 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 SPHARQ15513 63 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 ZER1Q7Z7L7 766 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 KBTBD6Q86V97 674 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 SCML4Q8N228 414 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 OR14L1PQ8NHC6 308 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 LRRC20Q8TCA0 184 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 PGAM5Q96HS1 289 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 DDX31Q9H8H2 851 aaKnown RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 NLKQ9UBE8 527 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 DHCR7Q9UBM7 475 aaKnown RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 USP3Q9Y6I4 520 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 A0A0A6YYH2 397 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 CIB4A0PJX0 185 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 A6NJ64 397 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 L7N2F9 121 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 HSPA12AO43301 675 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 NDUFV2P19404 249 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 CLCN2P51788 898 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 VAMP2P63027 116 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 OR7A5Q15622 319 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 MOGQ16653 247 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 OR2G6Q5TZ20 316 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 PATE1Q8WXA2 126 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 OR4K3Q96R72 315 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 ATOH8Q96SQ7 321 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 DPCDQ9BVM2 203 aaPredicted RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 MVB12BQ9H7P6 319 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 EPHA6Q9UF33 1036 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 DHDHQ9UQ10 334 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 CCDC163A0A0D9SF12 145 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 HTR3EA5X5Y0 456 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 F13BP05160 661 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 RPS17P08708 135 aaKnown RBP7.56□□□□□ -1.2
RIF1-205ENST00000444746 FASLGP48023 281 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 RAB28P51157 221 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 EID2Q8N6I1 236 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 OR5J2Q8NH18 312 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 UBE2FQ969M7 185 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 DTD2Q96FN9 168 aa7.56□□□□□ -1.2
RIF1-205ENST00000444746 LOC285095A0A1B0GVY8 99 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 PIP5K1CO60331 668 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 PIM1P11309 404 aaPredicted RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 RNH1P13489 461 aaKnown RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 C21orf33P30042 268 aaPredicted RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 DSC1Q08554 894 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 MICAQ29983 383 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 CCDC71Q8IV32 467 aaPredicted RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 GALNT6Q8NCL4 622 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 SGCDQ92629 289 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 RPL3LQ92901 407 aaKnown RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 CSNK1G1Q9HCP0 422 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 TAS2R10Q9NYW0 307 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 TMEM181Q9P2C4 612 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 PADI2Q9Y2J8 665 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 ASB1Q9Y576 335 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 OR14I1A6ND48 311 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 INMT-MINDY4F8WBC2 141 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 LINC01565O15544 149 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 ZNF12P17014 697 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 GNRHRP30968 328 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 EIF2B1Q14232 305 aaKnown RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.55□□□□□ -1.2
RIF1-205ENST00000444746 OR2L2Q8NH16 312 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 FAM46BQ96A09 425 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 WSB2Q9NYS7 404 aaPredicted RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 IFT52Q9Y366 437 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 A6NLC8 198 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 GRK1Q15835 563 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 Q8N402 240 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 PNLDC1Q8NA58 520 aaKnown RBP7.55□□□□□ -1.2
RIF1-205ENST00000444746 DZANK1Q9NVP4 752 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 RIMS3Q9UJD0 308 aa7.55□□□□□ -1.2
RIF1-205ENST00000444746 NWD2Q9ULI1 1742 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms