RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 CRYABP02511 175 aaKnown RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 HMGN2P05204 90 aaKnown RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 GABRA3P34903 492 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 SOAT1P35610 550 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 KRT20P35900 424 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 MRPL19P49406 292 aaKnown RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 PRIM2P49643 509 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 ATP4BP51164 291 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 POLR2JP52435 117 aaKnown RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 RPP38P78345 283 aaKnown RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 SF3A3Q12874 501 aaKnown RBP eCLIP11.34□□□□□ -0.59
USP1-203ENST00000442679 TP53BP2Q13625 1128 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 CYP27C1Q4G0S4 372 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 CGB2Q6NT52 195 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 MFSD12Q6NUT3 480 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 ZCCHC12Q6PEW1 402 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 NUP54Q7Z3B4 507 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 CPSF7Q8N684 471 aaKnown RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 OR2M7Q8NG81 312 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 OR56A1Q8NGH5 318 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 OR9I1Q8NGQ6 314 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 OR5AK3PQ8NH89 298 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 SFXN5Q8TD22 340 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 GPR151Q8TDV0 419 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 FAR1Q8WVX9 515 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 SLC9A6Q92581 669 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 CCDC115Q96NT0 180 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 COL21A1Q96P44 957 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 ZNF317Q96PQ6 595 aaPredicted RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 YIPF4Q9BSR8 244 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 Q9N2J8 555 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 DEPPQ9NTK1 212 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 BTNL2Q9UIR0 455 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 CBLCQ9ULV8 474 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 TRIM33Q9UPN9 1127 aa11.34□□□□□ -0.59
USP1-203ENST00000442679 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
USP1-203ENST00000442679 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 A0A0G2JMM0 328 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 RNF103-CHMP3A0A140T963 221 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 A0A1W2PPB8 328 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 A0A1W2PRS3 328 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 ASPDHA6ND91 283 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 OR6C70A6NIJ9 312 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 KIR3DP1A8MWS1 328 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 UGT2B11O75310 529 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 NKX2-2O95096 273 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 ALOX5P09917 674 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 ACP2P11117 423 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 PLA2G2AP14555 144 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 UQCRC2P22695 453 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 IL12BP29460 328 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 PIGAP37287 484 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 RFC3P40938 356 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 MAP3K8P41279 467 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 ZFP36L2P47974 494 aaKnown RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 ARFIP2P53365 341 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 GYS2P54840 703 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 IRX1P78414 480 aaPredicted RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 LRRC74AQ0VAA2 488 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 EFR3AQ14156 821 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 SQLEQ14534 574 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 LASP1Q14847 261 aaKnown RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 DECR1Q16698 335 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 PRAMEF20Q5VT98 475 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 DESI1Q6ICB0 168 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 BHLHB9Q6PI77 547 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 C6orf120Q7Z4R8 191 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 CLEC4FQ8N1N0 589 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 FBXW8Q8N3Y1 598 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 POGLUT1Q8NBL1 392 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 SLC16A11Q8NCK7 471 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 FBXO30Q8TB52 745 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 SPPL2AQ8TCT8 520 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 PIK3R3Q92569 461 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 JADE3Q92613 823 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 DIO2Q92813 273 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 HOXB13Q92826 284 aaPredicted RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 HGDQ93099 445 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 MIB2Q96AX9 1013 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 FRMD6Q96NE9 622 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 ADOQ96SZ5 270 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 SECISBP2Q96T21 854 aaKnown RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 BARD1Q99728 777 aaKnown RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 FAM173AQ9BQD7 235 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 INPP5KQ9BT40 448 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 ACTRT3Q9BYD9 372 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 OLAHQ9NV23 265 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 MRTO4Q9UKD2 239 aaKnown RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 CNOT11Q9UKZ1 510 aaKnown RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 FAF1Q9UNN5 650 aaPredicted RBP11.33□□□□□ -0.6
USP1-203ENST00000442679 COL6A6A6NMZ7 2263 aa11.33□□□□□ -0.6
USP1-203ENST00000442679 GXYLT2A0PJZ3 443 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 PINLYPA6NC86 204 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 ANKRD33BA6NCL7 494 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 CCDC154A6NI56 674 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 TSPAN2O60636 221 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 KCNH1O95259 989 aa11.32□□□□□ -0.6
USP1-203ENST00000442679 DNASE1L1P49184 302 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms