RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 HS6ST1O60243 411 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 AGFG2O95081 481 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PDYNP01213 254 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 SOAT1P35610 550 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRKAG1P54619 331 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 HMGCS1Q01581 520 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 VWA2Q5GFL6 755 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 CATSPEREQ5SY80 951 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 TTC23Q5W5X9 447 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 GALNT18Q6P9A2 607 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 NEK10Q6ZWH5 1172 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 ASB11Q8WXH4 323 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PMM1Q92871 262 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 UGT2B28Q9BY64 529 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR51B5Q9H339 312 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 UCK1Q9HA47 277 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 P4HTMQ9NXG6 502 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 PCYT1BQ9Y5K3 369 aaPredicted RBP6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 UNC80Q8N2C7 3258 aa6.93□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM47E-STBD1D6RA91 191 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 CST1P01037 141 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ALBP02768 609 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAPK12P53778 367 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 KCNJ10P78508 379 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 VLDLRP98155 873 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 CDC20Q12834 499 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 EPS8Q12929 822 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 NCF4Q15080 339 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 UGT8Q16880 541 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 AGAP7PQ5VUJ5 663 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 PRSS42Q7Z5A4 293 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SIRT6Q8N6T7 355 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 NKD1Q969G9 470 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 C8orf44Q96CB5 159 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 UBL7Q96S82 380 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 DPH2Q9BQC3 489 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 MRPS18BQ9Y676 258 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC28A1O00337 649 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 NTN3O00634 580 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ERN1O75460 977 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 GRK5P34947 590 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SHC2P98077 582 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 TP53BP2Q13625 1128 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 NXPE4Q6UWF7 544 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 FAM180AQ6UWF9 173 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 DBX2Q6ZNG2 339 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 STK32CQ86UX6 486 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZDHHC13Q8IUH4 622 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 CARFQ8N187 725 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 DAZLQ92904 295 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 PMEPA1Q969W9 287 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 RGMAQ96B86 450 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 THAP11Q96EK4 314 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 NRBF2Q96F24 287 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 CMTM7Q96FZ5 175 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 AGAP4Q96P64 663 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF160Q9HCG1 818 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ACOT13Q9NPJ3 140 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 C1orf109Q9NX04 203 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 STMN3Q9NZ72 180 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ERVK-18Q9QC07 812 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 AASSQ9UDR5 926 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF99A8MXY4 864 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 IDSB3KWA1 339 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 DSCR3O14972 297 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 TLX3O43711 291 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 XPNPEP2O43895 674 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 PFDN1O60925 122 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SERPINA1P01009 418 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 HOXB6P17509 224 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 FUT4P22083 530 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SOX11P35716 441 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 TGFBR1P36897 503 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 RPL38P63173 70 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 TLE3Q04726 772 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 CBX3Q13185 183 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 MAD2L1BPQ15013 274 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ZNF362Q5T0B9 420 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SLC29A4Q7RTT9 530 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ADGRF3Q8IZF5 1079 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 D2HGDHQ8N465 521 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 OR51Q1Q8NH59 317 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 SDHCQ99643 169 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 ARMC7Q9H6L4 198 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 MKKSQ9NPJ1 570 aaPredicted RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 PLCXD1Q9NUJ7 323 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 EXD2Q9NVH0 621 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 QPCTLQ9NXS2 382 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 RALYQ9UKM9 306 aaKnown RBP6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 TCFL5Q9UL49 500 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 PCDHGA6Q9Y5G7 932 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 V9GYQ6 96 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 WDR87Q6ZQQ6 2873 aa6.92□□□□□ -1.3
CDC42BPA-208ENST00000442054 PMS2P1A4D2B8 440 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 CLDN24A6NM45 220 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 C9orf172C9J069 976 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 CYP7B1O75881 506 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 NUDT14O95848 222 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 ETV6P41212 452 aa6.91□□□□□ -1.3
CDC42BPA-208ENST00000442054 MVKQ03426 396 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms