RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 FGF4P08620 206 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 ELAVL4P26378 380 aaKnown RBP17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 PSG6Q00889 435 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 ERCC6LQ2NKX8 1250 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 VASNQ6EMK4 673 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 ULK2Q8IYT8 1036 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 LIX1Q8N485 282 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 WDSUB1Q8N9V3 476 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 CDC26Q8NHZ8 85 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 BBS4Q96RK4 519 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 TIMP4Q99727 224 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 MECRQ9BV79 373 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 OSBPL11Q9BXB4 747 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 GLIPR2Q9H4G4 154 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 MIEF1Q9NQG6 463 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 C1orf109Q9NX04 203 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 Q9UFV3 132 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 DNAJC15Q9Y5T4 150 aa17.27■□□□□ 0.36
HMGB3P22-201ENST00000442010 MED12LQ86YW9 2145 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 FAM90A27PA6NNH2 459 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 ZNF500O60304 480 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 NPHS1O60500 1241 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 SPAG7O75391 227 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 SEC22BO75396 215 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 TRAPPC6AO75865 159 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 SLITRK5O94991 958 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 JUNP05412 331 aaKnown RBP17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 CHRNGP07510 517 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 CREB1P16220 341 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 MSX1P28360 303 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 NCBP2P52298 156 aaKnown RBP eCLIP17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 PSPHP78330 225 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 UGT3A2Q3SY77 523 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 EIPR1Q53HC9 387 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 ANGPTL8Q6UXH0 198 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 OR4N2Q8NGD1 307 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 OR1J4Q8NGS1 313 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 TCP10LQ8TDR4 215 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 ZNF764Q96H86 408 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 AMDHD1Q96NU7 426 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 COL21A1Q96P44 957 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 TMEM109Q9BVC6 243 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 PRDM14Q9GZV8 571 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 IQCGQ9H095 443 aaKnown RBP17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 LRTM1Q9HBL6 345 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 ALKBH4Q9NXW9 302 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 TAS2R9Q9NYW1 312 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 C19orf53Q9UNZ5 99 aaPredicted RBP17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 SLC6A5Q9Y345 797 aa17.26■□□□□ 0.35
HMGB3P22-201ENST00000442010 C15orf38-AP3S2A0A0A6YYH1 394 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 C2orf72A6NCS6 295 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 PRAMEF25A6NGN4 478 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 AHRRA9YTQ3 701 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 KDM4EB2RXH2 506 aaPredicted RBP17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 UPK1AO00322 258 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 RGS14O43566 566 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 ABCB7O75027 752 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 REM1O75628 298 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 SLU7O95391 586 aaKnown RBP17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 ARRB2P32121 409 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 MC3RP41968 323 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 ZFP36L2P47974 494 aaKnown RBP17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 RFTN2Q52LD8 501 aaPredicted RBP17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 ARL13AQ5H913 290 aaPredicted RBP17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 WIPI1Q5MNZ9 446 aaPredicted RBP17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 RIPPLY2Q5TAB7 128 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 LIX1LQ8IVB5 337 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 OR2L13Q8N349 312 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 MREGQ8N565 214 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 OR10Q1Q8NGQ4 319 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 C14orf79Q96F83 325 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 ADOQ96SZ5 270 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 KCNJ16Q9NPI9 418 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 KLRF1Q9NZS2 232 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 FIS1Q9Y3D6 152 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 POLQO75417 2590 aa17.25■□□□□ 0.35
HMGB3P22-201ENST00000442010 TMEM233B4DJY2 109 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 B4DXG7 233 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 LSM1O15116 133 aaKnown RBP17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 IFI6P09912 130 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 LINC00032P0C843 101 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 NEFHP12036 1026 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 BMP7P18075 431 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 SDC1P18827 310 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 PNLIPRP2P54317 469 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 GAS1P54826 345 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 IFFO1Q0D2I5 559 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 ACSF3Q4G176 576 aaPredicted RBP17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 DCST1Q5T197 706 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 TMEM107Q6UX40 140 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 MEX3BQ6ZN04 569 aaKnown RBP17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 FAM83FQ8NEG4 500 aaPredicted RBP17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 OR6Y1Q8NGX8 325 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 TMCO6Q96DC7 493 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 ELP4Q96EB1 424 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 CCT7Q99832 543 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 UGT2B28Q9BY64 529 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 SENP1Q9P0U3 644 aa17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.24■□□□□ 0.35
HMGB3P22-201ENST00000442010 V9GYY5 206 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms