RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 PRICKLE4Q2TBC4 344 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 MLIPQ5VWP3 458 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ZNF773Q6PK81 442 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 HS3ST5Q8IZT8 346 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PARP8Q8N3A8 854 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 SLC5A8Q8N695 610 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 GPR32P1Q8NGA4 272 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 OR52R1Q8NGF1 315 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 OR52J3Q8NH60 311 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PIGXQ8TBF5 258 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PTCHD1Q96NR3 888 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 FEVQ99581 238 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 PITX2Q99697 317 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 ARHGDIGQ99819 225 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 HOXD1Q9GZZ0 328 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 SLC38A1Q9H2H9 487 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TMEM27Q9HBJ8 222 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 MKKSQ9NPJ1 570 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 ENAMQ9NRM1 1142 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 TMEFF2Q9UIK5 374 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 KCND3Q9UK17 655 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 RARRES3Q9UL19 164 aa5.63□□□□□ -1.51
VPS50-205ENST00000441602 MAGED1Q9Y5V3 778 aaPredicted RBP5.63□□□□□ -1.51
VPS50-205ENST00000441602 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 A8MU76 341 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SMIM18P0DKX4 95 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TDGF1P13385 188 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 MAN2A2P49641 1150 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DCAF7P61962 342 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 OCA2Q04671 838 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DUSP8Q13202 625 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TRA2AQ13595 282 aaKnown RBP eCLIP5.62□□□□□ -1.51
VPS50-205ENST00000441602 GANABQ14697 944 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 DUSP5Q16690 384 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DUSP7Q16829 419 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF528Q3MIS6 628 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 FHL5Q5TD97 284 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 PEAR1Q5VY43 1037 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF605Q86T29 641 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF440Q8IYI8 595 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CDK20Q8IZL9 346 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 AQP11Q8NBQ7 271 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GNPDA2Q8TDQ7 276 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SAP25Q8TEE9 199 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GIMAP5Q96F15 307 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CNDP2Q96KP4 475 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 Q96MT0 163 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 MCHR1Q99705 422 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 LMF2Q9BU23 707 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 RBCK1Q9BYM8 510 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GRIP2Q9C0E4 1043 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 LRRN3Q9H3W5 708 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 NMNAT1Q9HAN9 279 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 FOLH1BQ9HBA9 442 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 FGF21Q9NSA1 209 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ACER3Q9NUN7 267 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 HEMK1Q9Y5R4 338 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 SPAG17Q6Q759 2223 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 A0A1W2PRQ8 180 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SNTNA6NMZ2 147 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 RPLP0P05388 317 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 CYP4B1P13584 511 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ENDOUP21128 410 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 LCN1P31025 176 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 PTGER1P34995 402 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GGT2P36268 569 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CRYBA2P53672 197 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DGCR6Q14129 220 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GPR68Q15743 365 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 MINDY4Q4G0A6 757 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 IQCCQ4KMZ1 466 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 TRMT12Q53H54 448 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 CASP12Q6UXS9 341 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 QSOX2Q6ZRP7 698 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 MED25Q71SY5 747 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF550Q7Z398 422 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GATAD2AQ86YP4 633 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 EID2Q8N6I1 236 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SLC16A11Q8NCK7 471 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 OR4D9Q8NGE8 314 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 OR14A16Q8NHC5 309 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DAZLQ92904 295 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 DGCR14Q96DF8 476 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 LOXL4Q96JB6 756 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DHRS1Q96LJ7 313 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 GFM1Q96RP9 751 aaKnown RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 MYCBPQ99417 103 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 SDF2Q99470 211 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 DGCR6LQ9BY27 220 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ZNF350Q9GZX5 532 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 CLN6Q9NWW5 311 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 RPS6KB2Q9UBS0 482 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 COPS7AQ9UBW8 275 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 NUP214P35658 2090 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 EME2A4GXA9 379 aaPredicted RBP5.62□□□□□ -1.51
VPS50-205ENST00000441602 M0R3G1 203 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 M0R3H8 397 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 ARHGAP33O14559 1287 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 SIGLEC6O43699 453 aa5.62□□□□□ -1.51
VPS50-205ENST00000441602 FMO6PO60774 539 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms