RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TRILQ7L0X0 811 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 R3HCC1LQ7Z5L2 792 aaKnown RBP21.67■■□□□ 1.06
VARS-217ENST00000440048 SLC44A2Q8IWA5 706 aaPredicted RBP21.67■■□□□ 1.06
VARS-217ENST00000440048 FAM57AQ8TBR7 257 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 NTNG2Q96CW9 530 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 PPP1R36Q96LQ0 422 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 ZNF597Q96LX8 424 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 NODALQ96S42 347 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 CACNA1DQ01668 2161 aa21.67■■□□□ 1.06
VARS-217ENST00000440048 SCAMP2O15127 329 aaKnown RBP21.66■■□□□ 1.06
VARS-217ENST00000440048 REM1O75628 298 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 SNX4O95219 450 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 TPOP07202 933 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 IFI6P09912 130 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 ESRRAP11474 423 aaPredicted RBP21.66■■□□□ 1.06
VARS-217ENST00000440048 MTFR2Q6P444 385 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 OR7A2PQ8NGA2 310 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 ZFP28Q8NHY6 868 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 ZBED6CLQ96FA7 236 aaPredicted RBP21.66■■□□□ 1.06
VARS-217ENST00000440048 COL21A1Q96P44 957 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 PHF12Q96QT6 1004 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 METTL7AQ9H8H3 244 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 ACSS1Q9NUB1 689 aaPredicted RBP21.66■■□□□ 1.06
VARS-217ENST00000440048 MEMO1Q9Y316 297 aa21.66■■□□□ 1.06
VARS-217ENST00000440048 NCOA6Q14686 2063 aaPredicted RBP21.65■■□□□ 1.06
VARS-217ENST00000440048 CELSR2Q9HCU4 2923 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 A0A1B0GVC2 190 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 OR6C70A6NIJ9 312 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 TSPAN2O60636 221 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 GPC1P35052 558 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 RPL3P39023 403 aaKnown RBP21.65■■□□□ 1.06
VARS-217ENST00000440048 CDK9P50750 372 aaKnown RBP21.65■■□□□ 1.06
VARS-217ENST00000440048 MANFP55145 182 aaKnown RBP21.65■■□□□ 1.06
VARS-217ENST00000440048 PSPHP78330 225 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 PSG6Q00889 435 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 EMX2Q04743 252 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 TMEM81Q6P7N7 255 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 C3P1Q6ZMU1 363 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 CD163Q86VB7 1156 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 PACS2Q86VP3 889 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 KIRREL3Q8IZU9 778 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 OR4N2Q8NGD1 307 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 ARL8AQ96BM9 186 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 SLC35A4Q96G79 324 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 AKTIPQ9H8T0 292 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 PNPOQ9NVS9 261 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 NKIRAS1Q9NYS0 192 aa21.65■■□□□ 1.06
VARS-217ENST00000440048 EIF3LQ9Y262 564 aaKnown RBP21.65■■□□□ 1.06
VARS-217ENST00000440048 NUP214P35658 2090 aaPredicted RBP21.65■■□□□ 1.06
VARS-217ENST00000440048 DDX5P17844 614 aaKnown RBP21.64■■□□□ 1.05
VARS-217ENST00000440048 EFNA1P20827 205 aaPredicted RBP21.64■■□□□ 1.05
VARS-217ENST00000440048 PTGDSP41222 190 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 MASP1P48740 699 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 MAD2L1Q13257 205 aaPredicted RBP21.64■■□□□ 1.05
VARS-217ENST00000440048 SMU1Q2TAY7 513 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 AGBL2Q5U5Z8 902 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 FNDC7Q5VTL7 733 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 HIST2H2BCQ6DN03 193 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 WDR53Q7Z5U6 358 aaPredicted RBP21.64■■□□□ 1.05
VARS-217ENST00000440048 NUDT8Q8WV74 236 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 ITLN2Q8WWU7 325 aaPredicted RBP21.64■■□□□ 1.05
VARS-217ENST00000440048 TMEM41AQ96HV5 264 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 ADOQ96SZ5 270 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 LDAHQ9H6V9 325 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 QPCTLQ9NXS2 382 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 B4GALT7Q9UBV7 327 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 OR10H1Q9Y4A9 318 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 HRH3Q9Y5N1 445 aa21.64■■□□□ 1.05
VARS-217ENST00000440048 NPIPA2E9PIF3 369 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 NPIPA3F8WFD2 350 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 ADAM10O14672 748 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 SUSD5O60279 629 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 ABCB7O75027 752 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 LAMP1P11279 417 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 G6PDP11413 515 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 GDF1P27539 372 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 KRT20P35900 424 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 MAN2A2P49641 1150 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 ADORA2A-AS1P86434 159 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 SNTA1Q13424 505 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 SLC30A6Q6NXT4 461 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 LARP4Q71RC2 724 aaKnown RBP eCLIP21.63■■□□□ 1.05
VARS-217ENST00000440048 KRTCAP2Q8N6L1 136 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 GNRHR2Q96P88 292 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 OSBPL11Q9BXB4 747 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 NUF2Q9BZD4 464 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 ASIC5Q9NY37 505 aa21.63■■□□□ 1.05
VARS-217ENST00000440048 NOP53Q9NZM5 478 aaKnown RBP21.63■■□□□ 1.05
VARS-217ENST00000440048 TRGV5A0A0B4J1U4 118 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 OR14I1A6ND48 311 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 PRAMEF25A6NGN4 478 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 E9PLN8 166 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 AQP7O14520 342 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 GNB5O14775 395 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 HCN1O60741 890 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 ICOSLGO75144 302 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 SNNO75324 88 aaPredicted RBP21.62■■□□□ 1.05
VARS-217ENST00000440048 PRPS1L1P21108 318 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 IL12BP29460 328 aa21.62■■□□□ 1.05
VARS-217ENST00000440048 GAB1Q13480 694 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms