RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PRAP1Q96NZ9 151 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 WFDC6Q9BQY6 131 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 POLDIP3Q9BY77 421 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 SLAMF7Q9NQ25 335 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 STARD7Q9NQZ5 370 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PHF11Q9UIL8 331 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 BAIAP2Q9UQB8 552 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 MYO16Q9Y6X6 1858 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 CACNA1CQ13936 2221 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 A0A1W2PRU2 124 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 H3BSH0 61 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PRKRAO75569 313 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 ZDHHC11BP0C7U3 371 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 ACADMP11310 421 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 UBL4AP11441 157 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PRKACAP17612 351 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 BMP7P18075 431 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 VIPR1P32241 457 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 SLC6A11P48066 632 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PITPNBP48739 271 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 MVDP53602 400 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PER3P56645 1201 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 OR10A3P58181 314 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 PCDH1Q08174 1060 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 C19orf57Q0VDD7 668 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 SNTB2Q13425 540 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 EXOSC2Q13868 293 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 KCNC3Q14003 757 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 ZNF628Q5EBL2 1059 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 TIGD3Q6B0B8 471 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 TEX261Q6UWH6 196 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 QSOX2Q6ZRP7 698 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 CCDC116Q8IYX3 515 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 CREB3L1Q96BA8 519 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 ATF6BQ99941 703 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 OR10A4Q9H209 315 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 METTL17Q9H7H0 456 aaPredicted RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 TAAR2Q9P1P5 351 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 REV1Q9UBZ9 1251 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 NUP50Q9UKX7 468 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 TMEM5Q9Y2B1 443 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 LSM2Q9Y333 95 aaKnown RBP8.54□□□□□ -1.04
COPB1-202ENST00000439561 U3KQ87 197 aa8.54□□□□□ -1.04
COPB1-202ENST00000439561 DICER1Q9UPY3 1922 aaKnown RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 TMEM229AB2RXF0 380 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SOCS6O14544 535 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 DVL2O14641 736 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SMAD9O15198 467 aaKnown RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 LANCL1O43813 399 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 EFCAB14O75071 495 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 TRIM3O75382 744 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 LEFTY1O75610 366 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SLC2A10O95528 541 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 LALBAP00709 142 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SAGP10523 405 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 POLR2CP19387 275 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 ITGB7P26010 798 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 GCGRP47871 477 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 NDUFA9Q16795 377 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 CDONQ4KMG0 1287 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 C3orf38Q5JPI3 329 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 PIP5KL1Q5T9C9 394 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SYT9Q86SS6 491 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 LSMEM1Q8N8F7 131 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 BBS1Q8NFJ9 593 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 OR52L1Q8NGH7 329 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 OR4D11Q8NGI4 311 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 RPLP0P6Q8NHW5 317 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 SMAP2Q8WU79 429 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 GIMAP1Q8WWP7 306 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 OR5P2Q8WZ92 322 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 CXorf40BQ96DE9 158 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 NXPE2Q96DL1 559 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 MARCH5Q9NX47 278 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 NFKBIL1Q9UBC1 381 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 RABL2AQ9UBK7 228 aaPredicted RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 ZNF69Q9UC07 566 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ENTPD4Q9Y227 616 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 KNL1Q8NG31 2342 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 A0A0B4J203 849 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 L7N2F9 121 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 INPPL1O15357 1258 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 CHP2O43745 196 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 DPM1O60762 260 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 STX11O75558 287 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 VNN2O95498 520 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 PLATP00750 562 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 LRG1P02750 347 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 RLN1P04808 185 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ALDOBP05062 364 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 CXCL3P19876 107 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 GSTM3P21266 225 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ANXA11P50995 505 aaKnown RBP8.53□□□□□ -1.04
COPB1-202ENST00000439561 STX4Q12846 297 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 GRIN2CQ14957 1233 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 MPEG1Q2M385 716 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ZDHHC20Q5W0Z9 365 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 NXPE4Q6UWF7 544 aa8.53□□□□□ -1.04
COPB1-202ENST00000439561 ZNF783Q6ZMS7 281 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms