RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 MOCOSQ96EN8 888 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ELF4Q99607 663 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 LRRN3Q9H3W5 708 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 CDCP1Q9H5V8 836 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 WNT16Q9UBV4 365 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 CBLCQ9ULV8 474 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 POMPQ9Y244 141 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 PLEKHM1Q9Y4G2 1056 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 PCDHGA3Q9Y5H0 932 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 SETD1AO15047 1707 aaKnown RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 A0A0G2JPF8 293 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 HNRNPCL3B7ZW38 293 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 HNRNPCL4P0DMR1 293 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 AZGP1P25311 298 aaKnown RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 GRK5P34947 590 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 RIDAP52758 137 aaKnown RBP11.44□□□□□ -0.58
NEK1-201ENST00000439128 TMEM52BQ4KMG9 183 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 PLEKHG7Q6ZR37 379 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 PIANPQ8IYJ0 282 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 LSMEM2Q8N112 164 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 SPTSSAQ969W0 71 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 SLC39A13Q96H72 371 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 DNTTIP1Q9H147 329 aa11.44□□□□□ -0.58
NEK1-201ENST00000439128 E7ENX8 843 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 BPNT1O95861 308 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 FPR1P21462 350 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ZNF140P52738 457 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 CEBPGP53567 150 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 WDR4P57081 412 aaKnown RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 GABREP78334 506 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 RSPO2Q6UXX9 243 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 P2RY8Q86VZ1 359 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 OR1N1Q8NGS0 311 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 WDR20Q8TBZ3 569 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 CANT1Q8WVQ1 401 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 S100ZQ8WXG8 99 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 GCDHQ92947 438 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 BIRC7Q96CA5 298 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 SEMA6CQ9H3T2 930 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 TM9SF3Q9HD45 589 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 RXFP3Q9NSD7 469 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ZNF446Q9NWS9 450 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 EURLQ9NYK6 297 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 TRIM64BA6NI03 449 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 CSNK1A1P48729 337 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ZXDBP98169 803 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ADAM15Q13444 863 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 PGBD2Q6P3X8 592 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 PAPD4Q6PIY7 484 aaKnown RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 OR4K3Q96R72 315 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ZBTB26Q9HCK0 441 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MBNL1Q9NR56 388 aaKnown RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 PAPPA2Q9BXP8 1791 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 GXYLT2A0PJZ3 443 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 EME2A4GXA9 379 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 C5orf51A6NDU8 294 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 GLSO94925 669 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 CYB561P49447 251 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MPP2Q14168 576 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ASB18Q6ZVZ8 466 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MFSD9Q8NBP5 474 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ELP5Q8TE02 316 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 TMEM19Q96HH6 336 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MRGPRX1Q96LB2 322 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MND1Q9BWT6 205 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 KCNIP1Q9NZI2 227 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MEMO1Q9Y316 297 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ARL6IP5O75915 188 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 MTHFD2P13995 350 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 PRKACGP22612 351 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 CTGFP29279 349 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 CHRNB4P30926 498 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 RPL5P46777 297 aaKnown RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 SMAD2Q15796 467 aaKnown RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 OR52E2Q8NGJ4 325 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 FAM129BQ96TA1 746 aa11.43□□□□□ -0.58
NEK1-201ENST00000439128 ZNF701Q9NV72 531 aaPredicted RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 C14orf166Q9Y224 244 aaKnown RBP11.43□□□□□ -0.58
NEK1-201ENST00000439128 PKD1L3Q7Z443 1732 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 CSO75390 466 aaKnown RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 IDUAP35475 653 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 HLA-BQ31612 363 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 KCTD21Q4G0X4 260 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 RFLNAQ6ZTI6 216 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 GID4Q8IVV7 300 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 FAM86C1Q9NVL1 165 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SDK1Q7Z5N4 2213 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 PRRT4C9JH25 899 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 FAAHO00519 579 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SCGB2A1O75556 95 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 LAMP1P11279 417 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 HMGA1P17096 107 aaKnown RBP11.42□□□□□ -0.58
NEK1-201ENST00000439128 NKPD1Q17RQ9 610 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 SLC15A3Q8IY34 581 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ZNF480Q8WV37 535 aa11.42□□□□□ -0.58
NEK1-201ENST00000439128 ZNF597Q96LX8 424 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms