RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 ZP2Q05996 745 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 PIN1Q13526 163 aaPredicted RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 GPR18Q14330 331 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC9A5Q14940 896 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 CLPPQ16740 277 aaPredicted RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 FAM214AQ32MH5 1076 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 MFSD4BQ5TF39 518 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 CACTIN-AS1Q8N1I8 211 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 DEFB123Q8N688 67 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 NATD1Q8N6N6 113 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 FCGR1BQ92637 280 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 KLHDC7BQ96G42 594 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF354BQ96LW1 612 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF607Q96SK3 696 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 GSDMCQ9BYG8 508 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ANKRA2Q9H9E1 313 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 CTPS2Q9NRF8 586 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ACSS1Q9NUB1 689 aaPredicted RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 P2RX2Q9UBL9 471 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ADAM29Q9UKF5 820 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ZAR1LA6NP61 321 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 H3BN98 237 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 PDE9AO76083 593 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 KRT8P05787 483 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 CERS1P27544 350 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 S100A5P33763 92 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 NUDT1P36639 197 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 KCNJ5P48544 419 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 DUSP2Q05923 314 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 HYAL2Q12891 473 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 LASP1Q14847 261 aaKnown RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 DCST1Q5T197 706 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 AGAP6Q5VW22 663 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 MLIPQ5VWP3 458 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 C18orf63Q68DL7 685 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 NRARPQ7Z6K4 114 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 CCDC116Q8IYX3 515 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 ACOT4Q8N9L9 421 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 TTLQ8NG68 377 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 MS4A6EQ96DS6 147 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 AGAP4Q96P64 663 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 FCRL4Q96PJ5 515 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 MAPKAP1Q9BPZ7 522 aa13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 MOV10Q9HCE1 1003 aaKnown RBP13.04□□□□□ -0.32
PTCHD3-201ENST00000438700 A0A1W2PR48 441 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 SAGE2PA6NJ88 616 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 STK25O00506 426 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 H1F0P07305 194 aaKnown RBP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 DDX5P17844 614 aaKnown RBP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 HIST1H1TP22492 207 aaPredicted RBP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 NTSP30990 170 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 OR2B6P58173 313 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 C1orf61Q13536 156 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 DGLUCYQ7Z3D6 616 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC46A3Q7Z3Q1 461 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TAF8Q7Z7C8 310 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 OR10G6Q8NH81 332 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 SLC7A13Q8TCU3 470 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 CNRIP1Q96F85 164 aaPredicted RBP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 NUAK2Q9H093 628 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 QRSL1Q9H0R6 528 aaKnown RBP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TBC1D17Q9HA65 648 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 ZW10O43264 779 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 CTSEP14091 401 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 UGT2B10P36537 528 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 HTR3AP46098 478 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TUBA1BP68363 451 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 LSM11P83369 360 aaKnown RBP eCLIP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 ZMAT1Q5H9K5 638 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TOR1AIP1Q5JTV8 583 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF425Q6IV72 752 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TMEM107Q6UX40 140 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TUBA1AQ71U36 451 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 WDR53Q7Z5U6 358 aaPredicted RBP13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 PARGQ86W56 976 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 NELL2Q99435 816 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TTYH2Q9BSA4 534 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 EQTNQ9NQ60 294 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 TAS2R7Q9NYW3 318 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 CPNE7Q9UBL6 633 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 ZNF221Q9UK13 617 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 SCN2AQ99250 2005 aa13.03□□□□□ -0.32
PTCHD3-201ENST00000438700 ARRDC5A6NEK1 342 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 AIFM1O95831 613 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 HMGN2P05204 90 aaKnown RBP13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 DRD2P14416 443 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 PPP2R1BP30154 601 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 TARDBPQ13148 414 aaKnown RBP eCLIP13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 MED22Q15528 200 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 ARMCX4Q5H9R4 360 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 ABHD17CQ6PCB6 329 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 AMER2Q8N7J2 671 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 DHRS1Q96LJ7 313 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 OR5M11Q96RB7 305 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 UCK2Q9BZX2 261 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 PRDM7Q9NQW5 492 aa13.02□□□□□ -0.32
PTCHD3-201ENST00000438700 REV1Q9UBZ9 1251 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms