RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PSKH1P11801 424 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 EIF2S2P20042 333 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MMP11P24347 488 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 HRH2P25021 359 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 STOMP27105 288 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PPP2R1BP30154 601 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 GTF2H1P32780 548 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 AVPR1AP37288 418 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTR1BP42025 376 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC1A4P43007 532 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 KIR3DL2P43630 455 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 COPB1P53618 953 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 LIMK2P53671 638 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PHEXP78562 749 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SSBP2P81877 361 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MBTD1Q05BQ5 628 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC3A1Q07837 685 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CYP24A1Q07973 514 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CRYZQ08257 329 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNTA1Q13424 505 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 EXOSC2Q13868 293 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 GK3PQ14409 553 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 EFNB3Q15768 340 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 VAMP3Q15836 100 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MRPL23Q16540 153 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CD300EQ496F6 205 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CELF3Q5SZQ8 465 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MARCH8Q5T0T0 291 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MORN5Q5VZ52 161 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TIGD3Q6B0B8 471 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 AWAT2Q6E213 333 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR4F3Q6IEY1 312 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR52W1Q6IF63 320 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CES5AQ6NT32 575 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 UQCC3Q6UW78 93 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRSS57Q6UWY2 283 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 UTS2BQ765I0 119 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 LINGO2Q7L985 606 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MRPL21Q7Z2W9 205 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 GPR141Q7Z602 305 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 DHDDSQ86SQ9 333 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 KCNMB4Q86W47 210 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PARGQ86W56 976 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 AMIGO1Q86WK6 493 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 KLBQ86Z14 1044 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TGIF2LXQ8IUE1 241 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ADHFE1Q8IWW8 467 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SPEM1Q8N4L4 309 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PARP16Q8N5Y8 322 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 BMPERQ8N8U9 685 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FBXO36Q8NEA4 188 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SDR9C7Q8NEX9 313 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR7G2Q8NG99 324 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR51G2Q8NGK0 314 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR10Q1Q8NGQ4 319 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAR1Q8WVX9 515 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 HSD17B8Q92506 261 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM3CQ92520 227 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 P3H4Q92791 437 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ATOH1Q92858 354 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PYCR2Q96C36 320 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 R3HDM4Q96D70 268 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SH3YL1Q96HL8 342 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SGK494Q96LW2 274 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCDC17Q96LX7 622 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 AMDHD1Q96NU7 426 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TSSK2Q96PF2 358 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SNX18Q96RF0 628 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF347Q96SE7 839 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CIB1Q99828 191 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRMT1Q99873 361 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 CTRCQ99895 268 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 C7orf50Q9BRJ6 194 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MED10Q9BTT4 135 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ABHD14AQ9BUJ0 271 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRMT61BQ9BVS5 477 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 RNF26Q9BY78 433 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 AMBRA1Q9C0C7 1298 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 DRC3Q9H069 523 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC38A1Q9H2H9 487 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FOXP1Q9H334 677 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR51B6Q9H340 312 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTL8Q9H568 366 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 WDR55Q9H6Y2 383 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 SP140LQ9H930 580 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 IL1RL2Q9HB29 575 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ADAP2Q9NPF8 381 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 HINT3Q9NQE9 182 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR2S2Q9NQN1 319 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 DYRK4Q9NR20 520 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ELOVL5Q9NYP7 299 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 PLEK2Q9NYT0 353 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TAS2R7Q9NYW3 318 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 TXNDC16Q9P2K2 825 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ASIC3Q9UHC3 531 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 MRM2Q9UI43 246 aaKnown RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 EMCNQ9ULC0 261 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAF1Q9UNN5 650 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 ABCG2Q9UNQ0 655 aa3.31□□□□□ -1.88
HMGB1P12-201ENST00000438594 FLVCR2Q9UPI3 526 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms