RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CD300LGQ6UXG3 332 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF852Q6ZMS4 543 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 UBE2Q1Q7Z7E8 422 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CLDN22Q8N7P3 220 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM163Q8TC26 289 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 S100A16Q96FQ6 103 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SLC41A3Q96GZ6 507 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 AHCYL2Q96HN2 611 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SAMD8Q96LT4 415 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 GTPBP2Q9BX10 602 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 KLHL31Q9H511 634 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MVB12BQ9H7P6 319 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SIAEQ9HAT2 523 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RC3H2Q9HBD1 1191 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TLR9Q9NR96 1032 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ACSS1Q9NUB1 689 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ACER3Q9NUN7 267 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 DNMT3AQ9Y6K1 912 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ANTXRLA6NF34 631 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF860A6NHJ4 632 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 H3BNC9 293 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 M0R233 179 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 NDUFB5O43674 189 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ABLIM3O94929 683 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ECDO95905 644 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ATF4P18848 351 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 XCR1P46094 333 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 PGDP52209 483 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MAZP56270 477 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TIAL1Q01085 375 aaKnown RBP eCLIP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TEKQ02763 1124 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ENPP2Q13822 863 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TAF13Q15543 124 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 DUSP7Q16829 419 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 HSD17B12Q53GQ0 312 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SNAP47Q5SQN1 464 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 BCL2L15Q5TBC7 163 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF776Q68DI1 518 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ANKRD54Q6NXT1 300 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF613Q6PF04 617 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 SLC16A12Q6ZSM3 486 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 GAREM2Q75VX8 874 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ARMCX6Q7L4S7 300 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 GDPD3Q7L5L3 318 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TAF8Q7Z7C8 310 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ASPGQ86U10 573 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 CCDC36Q8IYA8 594 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 OR2L2Q8NH16 312 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ADAD1Q96M93 576 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 C19orf43Q9BQ61 176 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 POLDIP3Q9BY77 421 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ACTRT3Q9BYD9 372 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MTHFD2LQ9H903 347 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 RANGRFQ9HD47 186 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 HCFC1R1Q9NWW0 138 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TXNL4BQ9NX01 149 aaKnown RBP6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MBD2Q9UBB5 411 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 UPB1Q9UBR1 384 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 ZNF69Q9UC07 566 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 GPR34Q9UPC5 381 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 MAB21L2Q9Y586 359 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 STON1Q9Y6Q2 735 aa6.32□□□□□ -1.4
CSDE1-205ENST00000438362 TRAPPC13A5PLN9 417 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 HPGDSO60760 199 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CSO75390 466 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CLEC3AO75596 197 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 KLHL18O94889 574 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 IFNA6P05013 189 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 H2AFB2P0C5Z0 115 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 NPPBP16860 134 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 RAB3BP20337 219 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ELAVL4P26378 380 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 RPS19P39019 145 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 POU6F2P78424 691 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PLK5Q496M5 336 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 FAM71E1Q6IPT2 247 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PYHIN1Q6K0P9 492 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 KRT77Q7Z794 578 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PLCZ1Q86YW0 608 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SPRYD4Q8WW59 207 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ACOT11Q8WXI4 607 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 NEURL3Q96EH8 262 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 RNF31Q96EP0 1072 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 GAL3ST1Q99999 423 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PSD2Q9BQI7 771 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ALG8Q9BVK2 526 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CDCA4Q9BXL8 241 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM121BQ9BXQ6 578 aaPredicted RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 GON7Q9BXV9 100 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 ACTR6Q9GZN1 396 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SLIRPQ9GZT3 109 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 PPIL3Q9H2H8 161 aaKnown RBP6.31□□□□□ -1.4
CSDE1-205ENST00000438362 TMEM184CQ9NVA4 438 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 COPZ2Q9P299 210 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 CLEC2DQ9UHP7 191 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 FBXL21Q9UKT6 434 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 SNX11Q9Y5W9 270 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 HYKKA2RU49 373 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 UBXN7O94888 489 aa6.31□□□□□ -1.4
CSDE1-205ENST00000438362 WISP3O95389 354 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms