RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 CLEC4DQ8WXI8 215 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 PLEK2Q9NYT0 353 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ERVK-19Q9WJR5 959 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 KIAA1210Q9ULL0 1709 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CENPBD1B2RD01 187 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 GABARAPO95166 117 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 PTGER4P35408 488 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 FNTBP49356 437 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 RING1Q06587 406 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 HABP2Q14520 560 aaPredicted RBP10.65□□□□□ -0.7
SCN4A-201ENST00000435607 LEG1Q6P5S2 330 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 OR6Q1Q8NGQ2 317 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 HES7Q9BYE0 225 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 PBX4Q9BYU1 374 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CD93Q9NPY3 652 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ACTR10Q9NZ32 417 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 GDE1Q9NZC3 331 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 STEAP1Q9UHE8 339 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 POMPQ9Y244 141 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 LRRC42Q9Y546 428 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 OR2T1O43869 369 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 PRKYO43930 277 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 SERPINA5P05154 406 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 MAGEA6P43360 314 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 GCGRP47871 477 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 P2RX1P51575 399 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ZNF33BQ06732 778 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 C6orf132Q5T0Z8 1188 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CES4AQ5XG92 561 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 OR4K1Q8NGD4 311 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ATF6BQ99941 703 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 OAZ3Q9UMX2 235 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 KIAA0355O15063 1070 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ZFAND5O76080 213 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 NUDT6P53370 316 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 TAS2R31P59538 309 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CTXN1P60606 82 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 RPL11P62913 178 aaKnown RBP10.65□□□□□ -0.7
SCN4A-201ENST00000435607 FAM210AQ96ND0 272 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 SLC2A13Q96QE2 648 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 UTP23Q9BRU9 249 aaKnown RBP10.65□□□□□ -0.7
SCN4A-201ENST00000435607 ACSL6Q9UKU0 697 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 TMEM265A0A087WTH1 108 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 RCCD1A6NED2 376 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 TSPAN15O95858 294 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A6P0DMU7 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A5P0DMU8 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A7P0DMV0 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A8P0DMV1 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A9P0DMV2 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 SLC2A5P22732 501 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 TBPL1P62380 186 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A2Q5DJT8 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A1Q5HYN5 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 MANEALQ5VSG8 457 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 CT45A3Q8NHU0 189 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 PEX13Q92968 403 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 LRCH3Q96II8 777 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 IL25Q9H293 177 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 MTHFD2LQ9H903 347 aaPredicted RBP10.65□□□□□ -0.7
SCN4A-201ENST00000435607 EXTL2Q9UBQ6 330 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 KIF25Q9UIL4 384 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 RNF6Q9Y252 685 aa10.65□□□□□ -0.7
SCN4A-201ENST00000435607 TRAV6A0A075B6T7 132 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 A0A1W2PPV4 95 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 CRYM-AS1A6NIL9 109 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 B4DXG7 233 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 CRTAPO75718 401 aaPredicted RBP10.65□□□□□ -0.71
SCN4A-201ENST00000435607 VASPP50552 380 aaPredicted RBP10.65□□□□□ -0.71
SCN4A-201ENST00000435607 EFNA3P52797 238 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 RPA4Q13156 261 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 NCBP2-AS2Q69YL0 99 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 SMYD5Q6GMV2 418 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 KCNIP4Q6PIL6 250 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 TMEM173Q86WV6 379 aaPredicted RBP10.65□□□□□ -0.71
SCN4A-201ENST00000435607 PPP1R3BQ86XI6 285 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 DNAJC22Q8N4W6 341 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 OR52E2Q8NGJ4 325 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 C16orf78Q8WTQ4 265 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 ZFYVE21Q9BQ24 234 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 KCND3Q9UK17 655 aa10.65□□□□□ -0.71
SCN4A-201ENST00000435607 F5H5K5 113 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 I3L521 148 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 TIMM8AO60220 97 aaPredicted RBP10.64□□□□□ -0.71
SCN4A-201ENST00000435607 G6PDP11413 515 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 CELP19835 753 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 EPHA1P21709 976 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 CD79BP40259 229 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 SHC2P98077 582 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 NXPE4Q6UWF7 544 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 TMEM178AQ8NBL3 297 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 FAM156AQ8NDB6 213 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 MAL2Q969L2 176 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 TWNKQ96RR1 684 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 PIP5K1AQ99755 562 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 LHX6Q9UPM6 363 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 TRAPPC2LH3BP13 241 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 CBX7O95931 251 aa10.64□□□□□ -0.71
SCN4A-201ENST00000435607 WNT11O96014 354 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms