RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 TBK1Q9UHD2 729 aa11.91□□□□□ -0.5
CDCA4P4-201ENST00000435216 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
CDCA4P4-201ENST00000435216 FBXL2Q9UKC9 423 aa11.91□□□□□ -0.5
CDCA4P4-201ENST00000435216 VPS13CQ709C8 3753 aa11.91□□□□□ -0.5
CDCA4P4-201ENST00000435216 PRRC2AP48634 2157 aaKnown RBP11.91□□□□□ -0.5
CDCA4P4-201ENST00000435216 FAM221AA4D161 298 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 TUBAL3A6NHL2 446 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 OR6C70A6NIJ9 312 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 B4DXG7 233 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 H0Y3Z8 333 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 UBFD1O14562 309 aaKnown RBP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 TO15178 435 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 ERN1O75460 977 aaKnown RBP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 CBR3O75828 277 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 ACTL6AO96019 429 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 ABHD2P08910 425 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 RHOXF2BP0C7M4 288 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 TMIGD3P0DMS9 266 aaPredicted RBP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 PYGBP11216 843 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 DRD2P14416 443 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 CTSSP25774 331 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 TIA1P31483 386 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 PRKAA2P54646 552 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 FOXA1P55317 472 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 LCP2Q13094 533 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 SNTA1Q13424 505 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 SF3B4Q15427 424 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 ERCC6LQ2NKX8 1250 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 FBXW10Q5XX13 1052 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 LUZP2Q86TE4 346 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 IFNEQ86WN2 208 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 PLCZ1Q86YW0 608 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 GCNT2Q8N0V5 402 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 OR7G2Q8NG99 324 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 FAM222BQ8WU58 562 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 TMCO6Q96DC7 493 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 MTBPQ96DY7 904 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 VSTM2LQ96N03 204 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 BTBD9Q96Q07 612 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 G6PC3Q9BUM1 346 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 OR2B2Q9GZK3 357 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 GSTO2Q9H4Y5 243 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 CALHM2Q9HA72 323 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 FOLH1BQ9HBA9 442 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 MID1IP1Q9NPA3 183 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 SLC35C2Q9NQQ7 365 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 TAS2R10Q9NYW0 307 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 SENP1Q9P0U3 644 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 FETUBQ9UGM5 382 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 RPH3AQ9Y2J0 694 aaPredicted RBP11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 WIF1Q9Y5W5 379 aa11.9□□□□□ -0.5
CDCA4P4-201ENST00000435216 MPDZO75970 2070 aa11.9□□□□□ -0.51
CDCA4P4-201ENST00000435216 CLCA1A8K7I4 914 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 TSPAN2O60636 221 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 JUNP05412 331 aaKnown RBP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 CPN1P15169 458 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 IL12BP29460 328 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 OPRM1P35372 400 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 GCKP35557 465 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 KRT20P35900 424 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 GFRA1P56159 465 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SLC29A2Q14542 456 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 HEPACAMQ14CZ8 416 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SPIN4Q56A73 249 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SPDYAQ5MJ70 313 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SH2D4BQ5SQS7 431 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 LARP4Q71RC2 724 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 TRMT10CQ7L0Y3 403 aaKnown RBP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SLC22A9Q8IVM8 553 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SLC44A2Q8IWA5 706 aaPredicted RBP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 GSPT2Q8IYD1 628 aaKnown RBP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 CCNYL1Q8N7R7 359 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 GBP7Q8N8V2 638 aaPredicted RBP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 ZPLD1Q8TCW7 415 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 INTS12Q96CB8 462 aaKnown RBP11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 L3HYPDHQ96EM0 354 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 SLC35A4Q96G79 324 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 BBS4Q96RK4 519 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 FOXC2Q99958 501 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 GIMAP4Q9NUV9 329 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 DKKL1Q9UK85 242 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 EMCNQ9ULC0 261 aa11.89□□□□□ -0.51
CDCA4P4-201ENST00000435216 A0A1W2PPM1 405 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 PLOD2O00469 737 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 SCO2O43819 266 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 BCAS2O75934 225 aaPredicted RBP11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 CD99P14209 185 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 DNASE1P24855 282 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 GRK2P25098 689 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 PEX19P40855 299 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 MC3RP41968 323 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 LHX2P50458 406 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 PKNOX1P55347 436 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 C2orf80Q0P641 193 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 ZNF155Q12901 538 aaPredicted RBP11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 POU4F3Q15319 338 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 ENPP6Q6UWR7 440 aa11.88□□□□□ -0.51
CDCA4P4-201ENST00000435216 KIF18BQ86Y91 864 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms