RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 HECTD3Q5T447 861 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 WASH2PQ6VEQ5 465 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 PRSS45Q7RTY3 260 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 IZUMO1Q8IYV9 350 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 OR5M3Q8NGP4 307 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 IFT46Q9NQC8 304 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 STOX2Q9P2F5 926 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 FAM183AA6NL82 134 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 NPIPB8E9PQR5 432 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 GFYI3L273 518 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 KHNYNO15037 678 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 APOC3P02656 99 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ARHGDIBP52566 201 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ERVFC1P60507 584 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 AP1S1P61966 158 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 MRPL58Q14197 206 aaKnown RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SYPL1Q16563 259 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC27A4Q6P1M0 643 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 LRRC28Q86X40 367 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 KLHL36Q8N4N3 616 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 OR51G2Q8NGK0 314 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 OR5D16Q8NGK9 328 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 RPLP0P6Q8NHW5 317 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ADAMTS19Q8TE59 1207 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ELMOD3Q96FG2 381 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC38A2Q96QD8 506 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 YIPF4Q9BSR8 244 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 ABCG4Q9H172 646 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 H2AFY2Q9P0M6 372 aaPredicted RBP10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 NUBP2Q9Y5Y2 271 aa10.89□□□□□ -0.67
HMGCS1-202ENST00000433297 A0A0B4J203 849 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 C7orf66A4D0T2 115 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 RTCAO00442 366 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC16A1P53985 500 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SNTB2Q13425 540 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ARL9Q6T311 187 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 C3P1Q6ZMU1 363 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 CAMKMTQ7Z624 323 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 STPG2Q8N412 459 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ASZ1Q8WWH4 475 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 BRF2Q9HAW0 419 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 BRD7Q9NPI1 651 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 NDOR1Q9UHB4 597 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SCP2D1Q9UJQ7 156 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 KCNMB2Q9Y691 235 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 CSNK1G3Q9Y6M4 447 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 CKAP5Q14008 2032 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SYNDIG1LA6NDD5 238 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 MID1O15344 667 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 FZD7O75084 574 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 RPL17P18621 184 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 DGCR2P98153 550 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 TAP2Q03519 686 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 TCTE1Q5JU00 501 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 CLVS2Q5SYC1 327 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SFRP5Q5T4F7 317 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 RNLSQ5VYX0 342 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 FBXO15Q8NCQ5 510 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF740Q8NDX6 193 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 BBS1Q8NFJ9 593 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 TRMT10AQ8TBZ6 339 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF354BQ96LW1 612 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 CYSLTR2Q9NS75 346 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ASB4Q9Y574 426 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 PLXNA4Q9HCM2 1894 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 L7N2F9 121 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 FRS3O43559 492 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 MMP20O60882 483 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ATG13O75143 517 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 NR2F1P10589 423 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 GAS1P54826 345 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SMIM11AP58511 58 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ERVK-21P61565 698 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 PTSQ03393 145 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 SLC3A1Q07837 685 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 CNTN1Q12860 1018 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ZNF273Q14593 569 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 GSG1Q2KHT4 349 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 NLRC3Q7RTR2 1065 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 ARIH2OSQ8N7S6 290 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 OR2T4Q8NH00 348 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 GOT1L1Q8NHS2 421 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 EXOSC8Q96B26 276 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 TMEM159Q96B96 161 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 GSDMCQ9BYG8 508 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 OR10A4Q9H209 315 aa10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 TTYH1Q9H313 450 aaPredicted RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 DDX31Q9H8H2 851 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 LYARQ9NX58 379 aaKnown RBP10.88□□□□□ -0.67
HMGCS1-202ENST00000433297 PDE4DIPQ5VU43 2346 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 ALPK3Q96L96 1907 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 EFCAB14O75071 495 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 PTBP1P26599 531 aaKnown RBP eCLIP10.87□□□□□ -0.671e-9■■□□□ 12.9
HMGCS1-202ENST00000433297 SERPINA4P29622 427 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 RPL35P42766 123 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 MAZP56270 477 aaKnown RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 CDKN3Q16667 212 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 CD200R1LQ6Q8B3 271 aa10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 PRSS55Q6UWB4 352 aaPredicted RBP10.87□□□□□ -0.67
HMGCS1-202ENST00000433297 C6orf120Q7Z4R8 191 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms