RNA–Protein interactions for RNA: ENST00000431543.6

LAMA4-208, Transcript of laminin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene LAMA4, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-208ENST00000431543 SZRD1Q7Z422 152 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 RETREG3Q86VR2 466 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 ATCAYQ86WG3 371 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 LGI4Q8N135 537 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 GALNT11Q8NCW6 608 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 OR56A1Q8NGH5 318 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 PSMA8Q8TAA3 256 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 SFXN5Q8TD22 340 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 ZNF675Q8TD23 568 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 CGREF1Q99674 301 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 SLC35A5Q9BS91 424 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 BTBD10Q9BSF8 475 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.29
LAMA4-208ENST00000431543 SERHLQ9NQF3 203 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 ZCCHC3Q9NUD5 404 aaKnown RBP13.21□□□□□ -0.29
LAMA4-208ENST00000431543 ABI3Q9P2A4 366 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
LAMA4-208ENST00000431543 A0A087WV62 115 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 RNF103-CHMP3A0A140T963 221 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ASPDHA6ND91 283 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 WWP2O00308 870 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 PLOD3O60568 738 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ZNF354AO60765 605 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ITGA10O75578 1167 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 OR2J2O76002 312 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 SOX30O94993 753 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 PTGER1P34995 402 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 MAGEA8P43361 318 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 PRKAG1P54619 331 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 PSME3P61289 254 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 RNF4P78317 190 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 TXNL4AP83876 142 aaKnown RBP13.2□□□□□ -0.3
LAMA4-208ENST00000431543 PMP22Q01453 160 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ZNF267Q14586 743 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-208ENST00000431543 EIF2S3LQ2VIR3 472 aaKnown RBP13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ZNF628Q5EBL2 1059 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 DLEU7Q6UYE1 221 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 HSDL2Q6YN16 418 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-208ENST00000431543 PGAM4Q8N0Y7 254 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ARHGAP24Q8N264 748 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 VWA5B2Q8N398 1253 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 ADCY4Q8NFM4 1077 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 OR7G1Q8NGA0 311 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 OR8J3Q8NGG0 315 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 SUN3Q8TAQ9 357 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 FAR1Q8WVX9 515 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 MAGED4Q96JG8 741 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 CXorf36Q9H7Y0 433 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 CXorf21Q9HAI6 301 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 LRFN1Q9P244 771 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 COPS7AQ9UBW8 275 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 FAF1Q9UNN5 650 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-208ENST00000431543 CFL2Q9Y281 166 aa13.2□□□□□ -0.3
LAMA4-208ENST00000431543 CLIC1O00299 241 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 CLPSP04118 112 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 IGKV3-11P04433 115 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 SP1P08047 785 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 CT62P0C5K7 136 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 TRHRP34981 398 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 CDKN2CP42773 168 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 CYB561P49447 251 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 PRIM2P49643 509 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 HLCSP50747 726 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 SLC25A3Q00325 362 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 DUSP2Q05923 314 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 SPRED3Q2MJR0 410 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 PRICKLE4Q2TBC4 344 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 RUNDC3AQ59EK9 446 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 DNAJC14Q6Y2X3 702 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 RINLQ6ZS11 566 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 C6orf120Q7Z4R8 191 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 DEFB107AQ8IZN7 70 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 RBM15BQ8NDT2 890 aaKnown RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 NUP43Q8NFH3 380 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 KAT2AQ92830 837 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 MCUR1Q96AQ8 359 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 SCMH1Q96GD3 660 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 ANKRD27Q96NW4 1050 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 ECSITQ9BQ95 431 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 CNPPD1Q9BV87 410 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 TRIM45Q9H8W5 580 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 TPT1P8Q9HAU6 139 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 SPAG4Q9NPE6 437 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 THUMPD1Q9NXG2 353 aaKnown RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 TAS2R1Q9NYW7 299 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 ADA2Q9NZK5 511 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 MAT2BQ9NZL9 334 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 SLAMF8Q9P0V8 285 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 MYOTQ9UBF9 498 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 PRODH2Q9UF12 536 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 C19orf53Q9UNZ5 99 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 ERVK-19Q9WJR5 959 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 PCDHGB3Q9Y5G1 929 aa13.19□□□□□ -0.3
LAMA4-208ENST00000431543 RP1L1Q8IWN7 2480 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-208ENST00000431543 ERICH4A6NGS2 130 aa13.18□□□□□ -0.3
LAMA4-208ENST00000431543 DUXAA6NLW8 204 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms