RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PDE9AO76083 593 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 DLGAP3O95886 979 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 IFNA14P01570 189 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 ALOX5P09917 674 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 NR2F1P10589 423 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 ACP2P11117 423 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 ITPKBP27987 946 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 SSTR4P31391 388 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 EMDP50402 254 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 PGDP52209 483 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 CRISP3P54108 245 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 EMP2P54851 167 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 SLC34A1Q06495 639 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 FAM98BQ52LJ0 330 aaKnown RBP16.96■□□□□ 0.31
HMGN1-206ENST00000431390 HEPHL1Q6MZM0 1159 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 FAM198BQ6UWH4 519 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 EIF3MQ7L2H7 374 aaKnown RBP16.96■□□□□ 0.31
HMGN1-206ENST00000431390 TMPRSS12Q86WS5 348 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 GALNT6Q8NCL4 622 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 SLC9A6Q92581 669 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 SLC35A4Q96G79 324 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 UBL7Q96S82 380 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-206ENST00000431390 MAGIXQ9H6Y5 334 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 AKIRIN1Q9H9L7 192 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-206ENST00000431390 BCL2L10Q9HD36 194 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 ADPRHL2Q9NX46 363 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 CALML5Q9NZT1 146 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 AURKCQ9UQB9 309 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 PCDHGB3Q9Y5G1 929 aa16.96■□□□□ 0.31
HMGN1-206ENST00000431390 HEMK1Q9Y5R4 338 aaPredicted RBP16.96■□□□□ 0.31
HMGN1-206ENST00000431390 PMS2P1A4D2B8 440 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 C9orf172C9J069 976 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 HRKO00198 91 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 PGM3O95394 542 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 CD63P08962 238 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 AQP1P29972 269 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SLC5A2P31639 672 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 FUT5Q11128 374 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SYPL1Q16563 259 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 DUSP5Q16690 384 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 C3orf38Q5JPI3 329 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 TBCELQ5QJ74 424 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SHISA6Q6ZSJ9 500 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SLC44A2Q8IWA5 706 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF615Q8N8J6 731 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 BBS10Q8TAM1 723 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 METTL21AQ8WXB1 218 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 NXPE2Q96DL1 559 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 OTUB1Q96FW1 271 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SENP5Q96HI0 755 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-206ENST00000431390 PYURFQ96I23 114 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 TRNT1Q96Q11 434 aaKnown RBP16.95■□□□□ 0.3
HMGN1-206ENST00000431390 LMF2Q9BU23 707 aaKnown RBP16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SPRY4Q9C004 299 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 OR10A5Q9H207 317 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 FOLH1BQ9HBA9 442 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 C6orf203Q9P0P8 240 aaPredicted RBP16.95■□□□□ 0.3
HMGN1-206ENST00000431390 PRODH2Q9UF12 536 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 C3orf18Q9UK00 162 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 SATB2Q9UPW6 733 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 KCNE3Q9Y6H6 103 aa16.95■□□□□ 0.3
HMGN1-206ENST00000431390 HNRNPRO43390 633 aaKnown RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 PRKD3O94806 890 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 NKX2-2O95096 273 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 BAG2O95816 211 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 AK1P00568 194 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 RAP2AP10114 183 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CRYBA2P53672 197 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CHRNB3Q05901 458 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF155Q12901 538 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 NCF4Q15080 339 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ZNHIT3Q15649 155 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ENPP6Q6UWR7 440 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 C6orf15Q6UXA7 325 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 C16orf62Q7Z3J2 963 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 PQLC1Q8N2U9 271 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ANKFN1Q8N957 763 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 MORN4Q8NDC4 146 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CHDHQ8NE62 594 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 SLC2A12Q8TD20 617 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CDS1Q92903 461 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 VSTM2LQ96N03 204 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF607Q96SK3 696 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 SEPHS2Q99611 448 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 TREX2Q9BQ50 279 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CRB3Q9BUF7 120 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 BTBD2Q9BX70 525 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 STOML1Q9UBI4 398 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CFL2Q9Y281 166 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 A0A0G2JPF8 293 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 HNRNPCL2B2RXH8 293 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 HNRNPCL3B7ZW38 293 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 M0QX08 132 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 TLX3O43711 291 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 NME6O75414 186 aaPredicted RBP16.94■□□□□ 0.3
HMGN1-206ENST00000431390 ZNF682O95780 498 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 DDAH2O95865 285 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CLPSP04118 112 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 IGKV3-11P04433 115 aa16.94■□□□□ 0.3
HMGN1-206ENST00000431390 CCNYL3P0C7X3 344 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms