RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 TDP1Q9NUW8 608 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 IMP3Q9NV31 184 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 TMEM260Q9NX78 707 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 GFOD1Q9NXC2 390 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 IKZF3Q9UKT9 509 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 FNDC3AQ9Y2H6 1198 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 TMEM184BQ9Y519 407 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PCDHA11Q9Y5I1 949 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 FRMPD3Q5JV73 1810 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 TMEM191CA6NGB0 347 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 OR6C76A6NM76 312 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 MASP2O00187 686 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 YIF1AO95070 293 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SIX3O95343 332 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 BCHEP06276 602 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 RHOP08100 348 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 RAP2AP10114 183 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 AHCYP23526 432 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 THBS4P35443 961 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 MC3RP41968 323 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 LIMK2P53671 638 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PNLIPRP2P54317 469 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 OSTNP61366 133 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 RELBQ01201 579 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SF3A2Q15428 464 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 GSG1Q2KHT4 349 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C9orf64Q5T6V5 341 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 AFTPHQ6ULP2 937 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SPESP1Q6UW49 350 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 LCLAT1Q6UWP7 414 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 KMT5CQ86Y97 462 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 CNTN4Q8IWV2 1026 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SYNE4Q8N205 404 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C12orf76Q8N812 135 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SPATA22Q8NHS9 363 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C9orf43Q8TAL5 461 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 NEK7Q8TDX7 302 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 TBCKQ8TEA7 893 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 KCTD13Q8WZ19 329 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 GGHQ92820 318 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 OSTF1Q92882 214 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SCRN2Q96FV2 425 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 LCORQ96JN0 433 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PGLYRP2Q96PD5 576 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SMAD5Q99717 465 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 MYOCQ99972 504 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 ASPNQ9BXN1 380 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PBX4Q9BYU1 374 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 TREM1Q9NP99 234 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PARD6AQ9NPB6 346 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 CCNB1IP1Q9NPC3 277 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SERINC1Q9NRX5 453 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 NTMQ9P121 344 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 LSM2Q9Y333 95 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 POLR3HQ9Y535 204 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PARP14Q460N5 1801 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 FAM240BA0A1B0GVZ2 78 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 FABP12A6NFH5 140 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 OR2AT4A6NND4 320 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 ZNF879B4DU55 563 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 AOC2O75106 756 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 CRCPO75575 148 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 RAD17O75943 681 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SLC25A27O95847 323 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PMP2P02689 132 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 HPXP02790 462 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 F13BP05160 661 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 HOXB5P09067 269 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PKMP14618 531 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PNLIPP16233 465 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 ABOP16442 354 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 HOXA5P20719 270 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PIK3CGP48736 1102 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 RAB2AP61019 212 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 BTG2P78543 158 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SP3Q02447 781 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SCARB2Q14108 478 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 KRT33BQ14525 404 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C14orf28Q4W4Y0 310 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C4orf17Q53FE4 359 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 KRTCAP3Q53RY4 240 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C3orf38Q5JPI3 329 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 KIAA0319Q5VV43 1072 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 PRAMEF18Q5VWM3 479 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 ZNF385CQ66K41 422 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 MZT2BQ6NZ67 158 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 Q6ZVU0 165 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 TIPARPQ7Z3E1 657 aaKnown RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 GPR149Q86SP6 731 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 CUZD1Q86UP6 607 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 KCNMB4Q86W47 210 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 AMIGO3Q86WK7 504 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 LRRC28Q86X40 367 aaPredicted RBP4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SPNS2Q8IVW8 549 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 MMP21Q8N119 569 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SLC34A3Q8N130 599 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 SVBPQ8N300 66 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 Q8N402 240 aa4.12□□□□□ -1.75
R3HDM1-206ENST00000429703 C10orf53Q8N6V4 93 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms