RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SLC39A3Q9BRY0 314 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 WHRNQ9P202 907 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 PRODH2Q9UF12 536 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZNF639Q9UID6 485 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 CES1P1Q9UKY3 287 aa16.56■□□□□ 0.24
UPK3BP1-201ENST00000428678 C1orf226A1L170 272 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 FRG2CA6NGY1 282 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR6C70A6NIJ9 312 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 CNOT4O95628 575 aaKnown RBP16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 POU2F1P14859 743 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 PCSK2P16519 638 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 DRD5P21918 477 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCKARP32238 428 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 KCNJ5P48544 419 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 PTH2RP49190 550 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 PCYT1AP49585 367 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCNG1P51959 295 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 IFT88Q13099 833 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 ACAP2Q15057 778 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 TRMT12Q53H54 448 aaKnown RBP16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 SGO1Q5FBB7 561 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 COMMD6Q7Z4G1 85 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCDC25Q86WR0 208 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR52B6Q8NGF0 335 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 FBF1Q8TES7 1133 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 ADOQ96SZ5 270 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 GSX2Q9BZM3 304 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 HEY2Q9UBP5 337 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 ADAM21Q9UKJ8 722 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 PSME2Q9UL46 239 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 SAR1BQ9Y6B6 198 aa16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 RAI1Q7Z5J4 1906 aaPredicted RBP16.55■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCDC189A1A4V9 331 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 C16orf97H3BN30 126 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR7A17O14581 309 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 TO15178 435 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 C2P06681 752 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 GRK2P25098 689 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 DPP4P27487 766 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 STX2P32856 288 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 ALDH9A1P49189 494 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 EMDP50402 254 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 MRPS35P82673 323 aaKnown RBP16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 DUSP2Q05923 314 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 BCL2A1Q16548 175 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 MROH9Q5TGP6 573 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 FAM180BQ6P0A1 224 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 KLC3Q6P597 504 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 CCDC91Q7Z6B0 441 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 METTL4Q8N3J2 472 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 OR4K17Q8NGC6 315 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZNF845Q96IR2 970 aaPredicted RBP16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 ERP44Q9BS26 406 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 ELOVL5Q9NYP7 299 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 SLC12A4Q9UP95 1085 aa16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 MRPS18CQ9Y3D5 142 aaKnown RBP16.54■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZIC3O60481 467 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 ABCB7O75027 752 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 IL12BP29460 328 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 KRT20P35900 424 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 KIR2DL2P43627 348 aaPredicted RBP16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 NAB1Q13506 487 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 EFR3AQ14156 821 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 METTL2BQ6P1Q9 378 aaKnown RBP16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 MEIOBQ8N635 442 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 PTGR2Q8N8N7 351 aaPredicted RBP16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 TRPC4APQ8TEL6 797 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 FIG4Q92562 907 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 MRRFQ96E11 262 aaKnown RBP16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 PHF21BQ96EK2 531 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 SLC35A4Q96G79 324 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 MARK4Q96L34 752 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 LRRC1Q9BTT6 524 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 PFDN4Q9NQP4 134 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 GPR55Q9Y2T6 319 aaPredicted RBP16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 ZNF780BQ9Y6R6 833 aa16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 CHD3Q12873 2000 aaKnown RBP16.53■□□□□ 0.24
UPK3BP1-201ENST00000428678 FAM187AA6NFU0 413 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 KLHL2O95198 593 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 PEPDP12955 493 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 B3GALT5-AS1P59052 145 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 GNG11P61952 73 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 C10orf62Q5T681 223 aaPredicted RBP16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 ANKRD34AQ69YU3 496 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 GBP7Q8N8V2 638 aaPredicted RBP16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 CNRIP1Q96F85 164 aaPredicted RBP16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 BTBD9Q96Q07 612 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 NAPGQ99747 312 aaPredicted RBP16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 ELOVL6Q9H5J4 265 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 ANKRA2Q9H9E1 313 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 GRHL1Q9NZI5 618 aa16.52■□□□□ 0.24
UPK3BP1-201ENST00000428678 NBEAL1Q6ZS30 2694 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 A0A096LPK6 155 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 C17orf51A8MQB3 221 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 B4DXG7 233 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 TSPAN2O60636 221 aa16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 NME6O75414 186 aaPredicted RBP16.51■□□□□ 0.23
UPK3BP1-201ENST00000428678 LOXP28300 417 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms