RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 S100PP25815 95 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 SOX18P35713 384 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 EEF1A2Q05639 463 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 MBTPS1Q14703 1052 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 ZNF630Q2M218 657 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PRAMEF19Q5SWL8 479 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 CPTPQ5TA50 214 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 Q6ZTK2 550 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 NR2C2APQ86WQ0 139 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 CPXM2Q8N436 756 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 L3MBTL4Q8NA19 623 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 OR52N2Q8NGI0 321 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PARK7Q99497 189 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 OR51M1Q9H341 326 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 WDR26Q9H7D7 661 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 NANSQ9NR45 359 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 SPHK1Q9NYA1 384 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PRR23D1E9PI22 279 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 FFAR1O14842 300 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PRAMEF11O60813 436 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 FZD7O75084 574 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 NDUFS6O75380 124 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 UBL3O95164 117 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 SIX6O95475 246 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 RECKO95980 971 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 HIST1H2ABP04908 130 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PRR23D2P0DMB1 279 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 MAPK3P27361 379 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PCBP3P57721 371 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 RAB8AP61006 207 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 KLF9Q13886 244 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 MINDY4Q4G0A6 757 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 DCST1Q5T197 706 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 FAM69AQ5T7M9 428 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 ARMC12Q5T9G4 340 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 NBPF12Q5TAG4 269 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 VASNQ6EMK4 673 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 HIST3H2AQ7L7L0 130 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 DNAJB7Q7Z6W7 309 aaPredicted RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 GNPDA2Q8TDQ7 276 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 ELP5Q8TE02 316 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 HIST1H2ACQ93077 130 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 MRPL48Q96GC5 212 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 TEFMQ96QE5 360 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 GPATCH2Q9NW75 528 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 MRTO4Q9UKD2 239 aaKnown RBP15.18■□□□□ 0.02
C9orf3-206ENST00000428313 PATJQ8NI35 1801 aa15.18■□□□□ 0.02
C9orf3-206ENST00000428313 TDRD15B5MCY1 1934 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 C2orf92A0A1B0GVN3 265 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 PMS2P1A4D2B8 440 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 MTMR11A4FU01 709 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 CD8B2A6NJW9 211 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 OR10H3O60404 316 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 CD8BP10966 210 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 ELAVL4P26378 380 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 CCND3P30281 292 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 PREPP48147 710 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 DGKGP49619 791 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 CDK6Q00534 326 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 SNTB2Q13425 540 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 COX20Q5RI15 118 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 HES5Q5TA89 166 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 ZNF660Q6AZW8 331 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 PGBD2Q6P3X8 592 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 LRRC70Q7Z2Q7 622 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 OXR1Q8N573 874 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 TTC16Q8NEE8 873 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 BPIFCQ8NFQ6 507 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 ELP4Q96EB1 424 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 FAIM2Q9BWQ8 316 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 IGLV3-10A0A075B6K4 115 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 OR6C75A6NL08 312 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 ARHGEF33A8MVX0 844 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 GSTZ1O43708 216 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 RAMP2O60895 175 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 RGS9O75916 674 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 MT-ND4P03905 459 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 CD3GP09693 182 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 NR0B1P51843 470 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 BCL2L1Q07817 233 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 STX4Q12846 297 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 SERTAD2Q14140 314 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 SYTL3Q4VX76 610 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 EOGTQ5NDL2 527 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 PTRHD1Q6GMV3 140 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 DHRS7BQ6IAN0 325 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 UQCC3Q6UW78 93 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 SLC36A4Q6YBV0 504 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 SLC30A8Q8IWU4 369 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 KRT78Q8N1N4 520 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 FAM98AQ8NCA5 519 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 GOT1L1Q8NHS2 421 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 SP7Q8TDD2 431 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 PRDM9Q9NQV7 894 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 TEX10Q9NXF1 929 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 ANGPT4Q9Y264 503 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 RUVBL1Q9Y265 456 aaKnown RBP15.17■□□□□ 0.02
C9orf3-206ENST00000428313 WDR90Q96KV7 1748 aa15.17■□□□□ 0.02
C9orf3-206ENST00000428313 PLXNA4Q9HCM2 1894 aa15.16■□□□□ 0.02
C9orf3-206ENST00000428313 LRRN3E7EW58 273 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms