RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 NEURL2Q9BR09 285 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SLC12A9Q9BXP2 914 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 SEC61A2Q9H9S3 476 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 CCDC59Q9P031 241 aaKnown RBP10.07□□□□□ -0.8
TCOF1-204ENST00000427724 MALT1Q9UDY8 824 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 OARD1Q9Y530 152 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 HSPB11Q9Y547 144 aa10.07□□□□□ -0.8
TCOF1-204ENST00000427724 ISPDA4D126 451 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 FAM172BPA6NC97 362 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF749O43361 778 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 SRPX2O60687 465 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 CRYZL1O95825 349 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PDYNP01213 254 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF28P17035 718 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 GGT1P19440 569 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 LTBRP36941 435 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 KIAA1024LP59773 190 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 LIPJQ5W064 366 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 TMEM225Q6GV28 225 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 TMPRSS9Q7Z410 1059 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 ATCAYQ86WG3 371 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF480Q8WV37 535 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 SLCO4A1Q96BD0 722 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 NXPE2Q96DL1 559 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 RNFT2Q96EX2 444 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 THUMPD1Q9NXG2 353 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PCDHGA8Q9Y5G5 932 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 BRCA2P51587 3418 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 C12orf71A8MTZ7 269 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 G3V3Y1 287 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 SLC1A7O00341 560 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 HCN1O60741 890 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 AHSA1O95433 338 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 IGHEP01854 428 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 CERS1P27544 350 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 DCKP27707 260 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 ID4P47928 161 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 RPL34P49207 117 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 RPS3AP61247 264 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 CCL7P80098 99 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 DPY19L1Q2PZI1 675 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PIP5KL1Q5T9C9 394 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 DESI1Q6ICB0 168 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 OR2B2Q9GZK3 357 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 DSN1Q9H410 356 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 TUBB1Q9H4B7 451 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 BOLA1Q9Y3E2 137 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 QSER1Q2KHR3 1735 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 ADAMDEC1O15204 470 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 TNFSF14O43557 240 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 LDB3O75112 727 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 MT-ND2P03891 347 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 HOXB6P17509 224 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PTNP21246 168 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 FPR1P21462 350 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PPP5CP53041 499 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 FOXK1P85037 733 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PRDX1Q06830 199 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 PCDH1Q08174 1060 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 IFI44LQ53G44 452 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 FIGNL1Q6PIW4 674 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 NARS2Q96I59 477 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 TRNT1Q96Q11 434 aaKnown RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 DPH2Q9BQC3 489 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 SNTG1Q9NSN8 517 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 CUEDC1Q9NWM3 386 aaPredicted RBP10.06□□□□□ -0.8
TCOF1-204ENST00000427724 IL37Q9NZH6 218 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 UPB1Q9UBR1 384 aa10.06□□□□□ -0.8
TCOF1-204ENST00000427724 TARM1B6A8C7 271 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 K7EQS6 105 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 CTSLP07711 333 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 SP9P0CG40 484 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 CBLP22681 906 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TALDO1P37837 337 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 HTR2BP41595 481 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF140P52738 457 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 SERTAD2Q14140 314 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 GFOD2Q3B7J2 385 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 FLYWCH1Q4VC44 716 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 PYCR3Q53H96 274 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 NOXRED1Q6NXP6 359 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TUBA3EQ6PEY2 450 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TMEM150AQ86TG1 271 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 ZNF100Q8IYN0 542 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 OR10G2Q8NGC3 310 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 SLC38A4Q969I6 547 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 NEIL2Q969S2 332 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TBC1D20Q96BZ9 403 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 SPATA9Q9BWV2 254 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 C11orf16Q9NQ32 467 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 IKZF2Q9UKS7 526 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 SPIN1Q9Y657 262 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 TRPM6Q9BX84 2022 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 HAT1O14929 419 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 C6orf47O95873 294 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 POLR2IP36954 125 aaKnown RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 VASPP50552 380 aaPredicted RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 HNRNPFP52597 415 aaKnown RBP10.05□□□□□ -0.8
TCOF1-204ENST00000427724 GFERP55789 205 aa10.05□□□□□ -0.8
TCOF1-204ENST00000427724 POU6F2P78424 691 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms