RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 DDX31Q9H8H2 851 aaKnown RBP12.72□□□□□ -0.37
HDAC6-206ENST00000426196 POPDC3Q9HBV1 291 aa12.72□□□□□ -0.37
HDAC6-206ENST00000426196 NGBQ9NPG2 151 aa12.72□□□□□ -0.37
HDAC6-206ENST00000426196 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
HDAC6-206ENST00000426196 GDF2Q9UK05 429 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-206ENST00000426196 A0A096LNT2 108 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 FAM234BA2RU67 622 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 H0YC42 278 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 PGRMC2O15173 223 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CPMP14384 443 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 S1PR1P21453 382 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 PTX3P26022 381 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CXCR5P32302 372 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 BSGP35613 385 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 XKP51811 444 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 NUDT6P53370 316 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 SUCLG1P53597 346 aaKnown RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 TPD52P55327 224 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CTBP2P56545 445 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CLDN15P56746 228 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 DSCR9P59020 149 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 LOXL1Q08397 574 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 ZNF672Q499Z4 452 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 RNASEH2BQ5TBB1 312 aaKnown RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CYB5R2Q6BCY4 276 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 GRHL2Q6ISB3 625 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 PPP4R4Q6NUP7 873 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CCDC137Q6PK04 289 aaKnown RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 BEND4Q6ZU67 534 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 STK32CQ86UX6 486 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 NUDT13Q86X67 352 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 MYLK4Q86YV6 388 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 IGDCC3Q8IVU1 814 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 C11orf24Q96F05 449 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 ZNF717Q9BY31 904 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-206ENST00000426196 PRRG4Q9BZD6 226 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 PLA2G12AQ9BZM1 189 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 CD244Q9BZW8 370 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 BRINP2Q9C0B6 783 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 MOCS1Q9NZB8 636 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 GPR52Q9Y2T5 361 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 SNX8Q9Y5X2 465 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 PSAT1Q9Y617 370 aa12.71□□□□□ -0.37
HDAC6-206ENST00000426196 H3BML4 177 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 LINC01387J3KSC0 135 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 LMX1BO60663 402 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 REM1O75628 298 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PGRP06401 933 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PORP16435 677 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-206ENST00000426196 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PSMB1P20618 241 aaKnown RBP12.7□□□□□ -0.38
HDAC6-206ENST00000426196 ZNF844Q08AG5 666 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 EFR3AQ14156 821 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 EXOSC7Q15024 291 aaKnown RBP12.7□□□□□ -0.38
HDAC6-206ENST00000426196 SGCBQ16585 318 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PGGHGQ32M88 737 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 MSS51Q4VC12 460 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 NCMAPQ5T1S8 102 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 SPATA6LQ8N4H0 392 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 STEAP2Q8NFT2 490 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 NEUROG1Q92886 237 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 EXT2Q93063 718 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 TMBIM1Q969X1 311 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 TRAF4Q9BUZ4 470 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PLAC1Q9HBJ0 212 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 FAIMQ9NVQ4 179 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 WHRNQ9P202 907 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 OPTCQ9UBM4 332 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PRODH2Q9UF12 536 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 PCDHGA11Q9Y5H2 935 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 TGP01266 2768 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 TENM1Q9UKZ4 2725 aa12.7□□□□□ -0.38
HDAC6-206ENST00000426196 GOLGA6L10A6NI86 522 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 TO15178 435 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 AQP8O94778 261 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 PYGBP11216 843 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 SLC25A16P16260 332 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 HK1P19367 917 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 HNF1AP20823 631 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 DRD5P21918 477 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 IL12BP29460 328 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 KRT20P35900 424 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 PPICP45877 212 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 ZNF75DP51815 510 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 CLDN20P56880 219 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 GANABQ14697 944 aaKnown RBP12.69□□□□□ -0.38
HDAC6-206ENST00000426196 SLMAPQ14BN4 828 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 OR4D1Q15615 310 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 PRICKLE4Q2TBC4 344 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 DNAJC14Q6Y2X3 702 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-206ENST00000426196 METTL25Q8N6Q8 603 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 OR10H5Q8NGA6 315 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 GRK7Q8WTQ7 553 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 SLC35A4Q96G79 324 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 GMPPAQ96IJ6 420 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-206ENST00000426196 ADAD1Q96M93 576 aaKnown RBP12.69□□□□□ -0.38
HDAC6-206ENST00000426196 ADOQ96SZ5 270 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 LRRC1Q9BTT6 524 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 GRIP2Q9C0E4 1043 aa12.69□□□□□ -0.38
HDAC6-206ENST00000426196 MAT2BQ9NZL9 334 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms