RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 PSMG1O95456 288 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 DRD5P21918 477 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 GPC1P35052 558 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 PTGDSP41222 190 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 TRPC1P48995 793 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 CASP6P55212 293 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 DCAF7P61962 342 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 PSG6Q00889 435 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 CDSNQ15517 529 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 HYAL4Q2M3T9 481 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 EMC4Q5J8M3 183 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 ARHGAP11AQ6P4F7 1023 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 MAMDC2Q7Z304 686 aaPredicted RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 SLC44A2Q8IWA5 706 aaPredicted RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 OR2L13Q8N349 312 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 KRTCAP2Q8N6L1 136 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 FBXO30Q8TB52 745 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 ITLN2Q8WWU7 325 aaPredicted RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 ARL8AQ96BM9 186 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 EFHD2Q96C19 240 aaPredicted RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 ERP27Q96DN0 273 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 ELP4Q96EB1 424 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 ZNF597Q96LX8 424 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 SLC6A15Q9H2J7 730 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 EQTNQ9NQ60 294 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 PNPOQ9NVS9 261 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 SUCOQ9UBS9 1254 aaKnown RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 WBP11Q9Y2W2 641 aaKnown RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 MEMO1Q9Y316 297 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 RAP2CQ9Y3L5 183 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 NUP214P35658 2090 aaPredicted RBP12.48□□□□□ -0.41
SNX3-204ENST00000426155 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
SNX3-204ENST00000426155 MED12Q93074 2177 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 CRYBG3Q68DQ2 2970 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 A0A087WV62 115 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 PLOD2O00469 737 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 PRRG2O14669 202 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 TBX19O60806 448 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 COQ9O75208 318 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 REM1O75628 298 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 IGHG3P01860 377 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 G6PDP11413 515 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 ESRRAP11474 423 aaPredicted RBP12.47□□□□□ -0.41
SNX3-204ENST00000426155 GRK2P25098 689 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 GDF1P27539 372 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 ASMTP46597 345 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 STX3Q13277 289 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.47□□□□□ -0.411e-7■■■■■ 32.6
SNX3-204ENST00000426155 RGS9BPQ6ZS82 235 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 TRILQ7L0X0 811 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 SZRD1Q7Z422 152 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 OR5M9Q8NGP3 310 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 OTUB1Q96FW1 271 aaPredicted RBP12.47□□□□□ -0.41
SNX3-204ENST00000426155 ZNF764Q96H86 408 aaPredicted RBP12.47□□□□□ -0.41
SNX3-204ENST00000426155 GNRHR2Q96P88 292 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 ADOQ96SZ5 270 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 OSBPL11Q9BXB4 747 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 NUF2Q9BZD4 464 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 STMN4Q9H169 189 aaPredicted RBP12.47□□□□□ -0.41
SNX3-204ENST00000426155 AKTIPQ9H8T0 292 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 PNPLA3Q9NST1 481 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 TAS2R9Q9NYW1 312 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 KLRF1Q9NZS2 232 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 KIAA1549Q9HCM3 1950 aa12.47□□□□□ -0.41
SNX3-204ENST00000426155 PCNX3Q9H6A9 2034 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 ANKRD33BA6NCL7 494 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 PRAMEF25A6NGN4 478 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 TSPAN2O60636 221 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 LAMP1P11279 417 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 MAPK1P28482 360 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 HPCAL1P37235 193 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 FRKP42685 505 aaPredicted RBP12.46□□□□□ -0.41
SNX3-204ENST00000426155 MASP1P48740 699 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 MAN2A2P49641 1150 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 RPL14P50914 215 aaKnown RBP12.46□□□□□ -0.41
SNX3-204ENST00000426155 PRKAG1P54619 331 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 SLC10A1Q14973 349 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 TBCELQ5QJ74 424 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 TMEM198Q66K66 360 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 ANGPTL8Q6UXH0 198 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 LARP4Q71RC2 724 aaKnown RBP eCLIP12.46□□□□□ -0.417e-6■□□□□ 9
SNX3-204ENST00000426155 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 MRGPRGQ86SM5 289 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 MARVELD2Q8N4S9 558 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 NTNG2Q96CW9 530 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 SLC35A4Q96G79 324 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 COL21A1Q96P44 957 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 SECISBP2Q96T21 854 aaKnown RBP12.46□□□□□ -0.41
SNX3-204ENST00000426155 LDAHQ9H6V9 325 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 EXO5Q9H790 373 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 SIRT3Q9NTG7 399 aaPredicted RBP12.46□□□□□ -0.41
SNX3-204ENST00000426155 FLRT3Q9NZU0 649 aa12.46□□□□□ -0.41
SNX3-204ENST00000426155 MARCOQ9UEW3 520 aaPredicted RBP12.46□□□□□ -0.41
SNX3-204ENST00000426155 ATP6V1HQ9UI12 483 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms