RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RFPL3SP0C7P2 107 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 NTSP30990 170 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 MPIP34949 423 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 KRT20P35900 424 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.551e-9■■□□□ 13.4
SGCE-203ENST00000425444 DCAF7P61962 342 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 DUSP8Q13202 625 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 TOMM20Q15388 145 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 GXYLT1Q4G148 440 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 WLSQ5T9L3 541 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 BICRALQ6AI39 1079 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 NOXRED1Q6NXP6 359 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 TRIM46Q7Z4K8 759 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 CAMKMTQ7Z624 323 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 PACS2Q86VP3 889 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 CLYBLQ8N0X4 340 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 FAM76AQ8TAV0 307 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 SARAFQ96BY9 339 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 CTHRC1Q96CG8 243 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 OMA1Q96E52 524 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 HSPBAP1Q96EW2 488 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 C11orf24Q96F05 449 aaPredicted RBP11.64□□□□□ -0.55
SGCE-203ENST00000425444 RILPQ96NA2 401 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 GPATCH1Q9BRR8 931 aaKnown RBP11.64□□□□□ -0.55
SGCE-203ENST00000425444 TRMOQ9BU70 441 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 MECRQ9BV79 373 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 GATA5Q9BWX5 397 aaPredicted RBP11.64□□□□□ -0.55
SGCE-203ENST00000425444 CLEC4MQ9H2X3 399 aaPredicted RBP11.64□□□□□ -0.55
SGCE-203ENST00000425444 ZNF395Q9H8N7 513 aaPredicted RBP11.64□□□□□ -0.55
SGCE-203ENST00000425444 ANKRA2Q9H9E1 313 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 MYNNQ9NPC7 610 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 SIRT5Q9NXA8 310 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 SLC17A7Q9P2U7 560 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 ACAD8Q9UKU7 415 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 RNF6Q9Y252 685 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 PTGDR2Q9Y5Y4 395 aa11.64□□□□□ -0.55
SGCE-203ENST00000425444 ANKRD33BA6NCL7 494 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 FRG2CA6NGY1 282 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 SUSD5O60279 629 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 HCN1O60741 890 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 SEC22BO75396 215 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 TRAPPC6AO75865 159 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 SNX4O95219 450 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 LY6G6DO95868 133 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 JUNP05412 331 aaKnown RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 ABCB1P08183 1280 aaPredicted RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 NEFHP12036 1026 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 ALDH3A1P30838 453 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 PPICP45877 212 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 TRPC1P48995 793 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 EMDP50402 254 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 ZNF155Q12901 538 aaPredicted RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 ACAD11Q709F0 780 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 IKBIPQ70UQ0 350 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 CCDC71Q8IV32 467 aaPredicted RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 DDIASQ8IXT1 998 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 ZZZ3Q8IYH5 903 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 RPRMLQ8N4K4 120 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 MARVELD2Q8N4S9 558 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 GOT1L1Q8NHS2 421 aaPredicted RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 TCP10LQ8TDR4 215 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 RND1Q92730 232 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 ERP27Q96DN0 273 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 STMN4Q9H169 189 aaPredicted RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 SLC6A15Q9H2J7 730 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 LRTM1Q9HBL6 345 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 PROK2Q9HC23 129 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 EML4Q9HC35 981 aaKnown RBP11.63□□□□□ -0.55
SGCE-203ENST00000425444 QPCTLQ9NXS2 382 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 ALKBH4Q9NXW9 302 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 KLRF1Q9NZS2 232 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 HRH3Q9Y5N1 445 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 MPDZO75970 2070 aa11.63□□□□□ -0.55
SGCE-203ENST00000425444 C15orf38-AP3S2A0A0A6YYH1 394 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 A0A1B0GVC2 190 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 GNB5O14775 395 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 NPHS1O60500 1241 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 COQ9O75208 318 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 UGT2B11O75310 529 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 TRIM3O75382 744 aaPredicted RBP11.62□□□□□ -0.55
SGCE-203ENST00000425444 ERN1O75460 977 aaKnown RBP11.62□□□□□ -0.55
SGCE-203ENST00000425444 CHRNGP07510 517 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 NAGAP17050 411 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 ACVR2AP27037 513 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 IL12BP29460 328 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 SOX18P35713 384 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 CASP3P42574 277 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 RPL38P63173 70 aaKnown RBP11.62□□□□□ -0.55
SGCE-203ENST00000425444 PMPCAQ10713 525 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 KRT71Q3SY84 523 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 EMC4Q5J8M3 183 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 KANK2Q63ZY3 851 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 FAM71E1Q6IPT2 247 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 TMEM107Q6UX40 140 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 B3GNT6Q6ZMB0 384 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 ZCCHC23Q6ZST2 131 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 NUP54Q7Z3B4 507 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 OR10Q1Q8NGQ4 319 aa11.62□□□□□ -0.55
SGCE-203ENST00000425444 NEIL3Q8TAT5 605 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms