RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 COG8Q96MW5 612 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SPATA13Q96N96 652 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 AGPAT1Q99943 283 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 RAB11FIP5Q9BXF6 653 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 DEFB126Q9BYW3 111 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SHARPINQ9H0F6 387 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SLC25A51Q9H1U9 297 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 TRIM45Q9H8W5 580 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 SEMA4BQ9NPR2 832 aaPredicted RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 UTP6Q9NYH9 597 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 ZNF226Q9NYT6 803 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 LPAR3Q9UBY5 353 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 DRG1Q9Y295 367 aaKnown RBP4.45□□□□□ -1.7
SFXN1-202ENST00000421887 USF3Q68DE3 2245 aa4.45□□□□□ -1.7
SFXN1-202ENST00000421887 HEATR5BQ9P2D3 2071 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ATP6AP2A0A1C7CYW4 349 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 AQP7P3A6NL99 342 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 H0YGG7 62 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ACOT8O14734 319 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ATP6AP2O75787 350 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 PKMP14618 531 aaKnown RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 PECAM1P16284 738 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 CMPK1P30085 196 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OPRM1P35372 400 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 GJC1P36383 396 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 MAGEA5P43359 124 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 XCR1P46094 333 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 CLNS1AP54105 237 aaKnown RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OR4D2P58180 307 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 MLF1P58340 268 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 SLC26A5P58743 744 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ARF3P61204 181 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 VAMP2P63027 116 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 IFI35P80217 286 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 SLC10A1Q14973 349 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 HSP90AA4PQ58FG1 418 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 SIRPB2Q5JXA9 342 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OTUD3Q5T2D3 398 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 KCTD11Q693B1 232 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 MRNIPQ6NTE8 343 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 KIAA0408Q6ZU52 694 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 TRILQ7L0X0 811 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 TAS2R42Q7RTR8 314 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 SNX20Q7Z614 316 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 SLC44A2Q8IWA5 706 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 FBXW8Q8N3Y1 598 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 LIX1Q8N485 282 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 LINC01555Q8NAE3 123 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OR4K2Q8NGD2 314 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OR2L8Q8NGY9 312 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 OR51Q1Q8NH59 317 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 CFAP61Q8NHU2 1237 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 GSDMBQ8TAX9 411 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 PIK3IP1Q96FE7 263 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 REG4Q9BYZ8 158 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 TTTY12Q9BZ98 90 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ZDHHC11Q9H8X9 412 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ZBTB26Q9HCK0 441 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 C6orf203Q9P0P8 240 aaPredicted RBP4.44□□□□□ -1.7
SFXN1-202ENST00000421887 CIDEBQ9UHD4 219 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 FAM153AQ9UHL3 310 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 HEY1Q9Y5J3 304 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 ARL5AQ9Y689 179 aa4.44□□□□□ -1.7
SFXN1-202ENST00000421887 A0A087WYN8 130 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 TRGV5A0A0B4J1U4 118 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 A0A0U1RQJ8 604 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 A0A1W2PPR1 153 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 C5orf60A6NFR6 353 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 A8MVJ9 347 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 H0YIG0 161 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 GAPDHSO14556 408 aaPredicted RBP4.43□□□□□ -1.7
SFXN1-202ENST00000421887 DNPH1O43598 174 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 CCNT2O60583 730 aaKnown RBP4.43□□□□□ -1.7
SFXN1-202ENST00000421887 CDC123O75794 336 aaPredicted RBP4.43□□□□□ -1.7
SFXN1-202ENST00000421887 AP2A2O94973 939 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 EPOP01588 193 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 IGHG3P01860 377 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 CD48P09326 243 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 TPBGLP0DKB5 382 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 TCF4P15884 667 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 CREB1P16220 341 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 SRD5A1P18405 259 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 ACADLP28330 430 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 IDUAP35475 653 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 TIMP3P35625 211 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 PTDSS1P48651 473 aaKnown RBP4.43□□□□□ -1.7
SFXN1-202ENST00000421887 PRKAA2P54646 552 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 CSE1LP55060 971 aaKnown RBP4.43□□□□□ -1.7
SFXN1-202ENST00000421887 GBE1Q04446 702 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 FAM53BQ14153 422 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 PTPRCAPQ14761 206 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 PDK1Q15118 436 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 PDK2Q15119 407 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 TAF1AQ15573 450 aaPredicted RBP4.43□□□□□ -1.7
SFXN1-202ENST00000421887 SLC1A5Q15758 541 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 HKDC1Q2TB90 917 aa4.43□□□□□ -1.7
SFXN1-202ENST00000421887 KRT71Q3SY84 523 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms