RNA–Protein interactions for RNA: ENST00000421852.5

TMEM41A-203, Transcript of transmembrane protein 41A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM41A, Length 2,827 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-203ENST00000421852 COL26A1Q96A83 441 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 TMCO6Q96DC7 493 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 KATNB1Q9BVA0 655 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 PRRG3Q9BZD7 231 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 ACSS1Q9NUB1 689 aaPredicted RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 TMA7Q9Y2S6 64 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 CHST2Q9Y4C5 530 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 TRANK1O15050 2925 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 NUP210Q8TEM1 1887 aaPredicted RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 SPEGQ15772 3267 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 MN1Q10571 1320 aaPredicted RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 PIP5K1CO60331 668 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 APEX1P27695 318 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 NTSP30990 170 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 WNT4P56705 351 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 PRDX1Q06830 199 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 SLC9A5Q14940 896 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 ZNF791Q3KP31 576 aaPredicted RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 TBRG1Q3YBR2 411 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 PYDC2Q56P42 97 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 C1orf94Q6P1W5 598 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 RAB43Q86YS6 212 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 SMG7Q92540 1137 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 FGF11Q92914 225 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 ART5Q96L15 291 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 CAMK1GQ96NX5 476 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 FYTTD1Q96QD9 318 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 SLC6A20Q9NP91 592 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 ZSCAN32Q9NX65 697 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 NUFIP1Q9UHK0 495 aaKnown RBP12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
TMEM41A-203ENST00000421852 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 SHISA3A0PJX4 238 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 MEIOCA2RUB1 952 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ZIC2O95409 532 aaPredicted RBP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 FUT1P19526 365 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 SMIM11AP58511 58 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 RPA4Q13156 261 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 FGL2Q14314 439 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ZNF730Q6ZMV8 503 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 IQCF2Q8IXL9 164 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ATP6V1C2Q8NEY4 427 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 TP53INP1Q96A56 240 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 MS4A6EQ96DS6 147 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ST6GAL2Q96JF0 529 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 PRRC1Q96M27 445 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 KIF26AQ9ULI4 1882 aaPredicted RBP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 MYO15AQ9UKN7 3530 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 TRBV23OR9-2A0A075B6M9 112 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 C2orf92A0A1B0GVN3 265 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 A0A1W2PP55 124 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ZC3H12DA2A288 527 aaKnown RBP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 SYNDIG1LA6NDD5 238 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 TBX19O60806 448 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 LIMS3P0CW19 117 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 LIMS4P0CW20 117 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 NR2F6P10588 404 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 CPEP16870 476 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 MAT2AP31153 395 aaKnown RBP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 MTNR1AP48039 350 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 KHKP50053 298 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 SMSP52788 366 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 LBX1P52954 281 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ARHGAP19Q14CB8 494 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 GLYR1Q49A26 553 aaPredicted RBP12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ZNF544Q6NX49 715 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ADAMTSL4Q6UY14 1074 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 FAM92BQ6ZTR7 304 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 OR4N5Q8IXE1 308 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 TEX47Q8TBZ9 253 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 UBASH3BQ8TF42 649 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 OR7D2Q96RA2 312 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 ASB4Q9Y574 426 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 CSNK1G3Q9Y6M4 447 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 KNL1Q8NG31 2342 aa12.87□□□□□ -0.35
TMEM41A-203ENST00000421852 A0A0B4J293 547 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 FAM47E-STBD1D6RA91 191 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 RPN2P04844 631 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 HIST1H1TP22492 207 aaPredicted RBP12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 EFNB1P98172 346 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 IRF4Q15306 451 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 P2RY14Q15391 338 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 FAM214AQ32MH5 1076 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 PDZK1Q5T2W1 519 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 SLC27A4Q6P1M0 643 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 OR4Q3Q8NH05 313 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 TMEM163Q8TC26 289 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 RNF31Q96EP0 1072 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 KCTD7Q96MP8 289 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 CRISPLD2Q9H0B8 497 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 SLC6A17Q9H1V8 727 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 SLC38A1Q9H2H9 487 aa12.86□□□□□ -0.35
TMEM41A-203ENST00000421852 WDR26Q9H7D7 661 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms