RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	ITPA	Q9BY32	194 aa		15.04	■□□□□ -0
DDR1-231	ENST00000417521	MYNN	Q9NPC7	610 aa		15.04	■□□□□ -0
DDR1-231	ENST00000417521	QPCTL	Q9NXS2	382 aa		15.04	■□□□□ -0
DDR1-231	ENST00000417521	DIDO1	Q9BTC0	2240 aa	Known RBP	15.04	■□□□□ -0
DDR1-231	ENST00000417521	SUSD5	O60279	629 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	SNX4	O95219	450 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	LBP	P18428	481 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	DRD5	P21918	477 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	IDH3A	P50213	366 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	DIO3	P55073	304 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	FBXW4	P57775	412 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	EMX2	Q04743	252 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	SF3A3	Q12874	501 aa	Known RBP eCLIP	15.03	■□□□□ -0
DDR1-231	ENST00000417521	TMEM198	Q66K66	360 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	SP5	Q6BEB4	398 aa	Predicted RBP	15.03	■□□□□ -0
DDR1-231	ENST00000417521	ZNF787	Q6DD87	383 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	NXN	Q6DKJ4	435 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	CGB2	Q6NT52	195 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	IKBIP	Q70UQ0	350 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	TRIL	Q7L0X0	811 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	LIX1	Q8N485	282 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	SIMC1	Q8NDZ2	872 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	ZNF317	Q96PQ6	595 aa	Predicted RBP	15.03	■□□□□ -0
DDR1-231	ENST00000417521	BBS4	Q96RK4	519 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	EBF4	Q9BQW3	602 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	ANGPTL4	Q9BY76	406 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	TP63	Q9H3D4	680 aa	Predicted RBP	15.03	■□□□□ -0
DDR1-231	ENST00000417521	MIEF1	Q9NQG6	463 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	DCTN4	Q9UJW0	460 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	EXO1	Q9UQ84	846 aa	Known RBP	15.03	■□□□□ -0
DDR1-231	ENST00000417521	HRH3	Q9Y5N1	445 aa		15.03	■□□□□ -0
DDR1-231	ENST00000417521	LRRC3C	A6NJW4	275 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	MYO1G	B0I1T2	1018 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	PRSS44	E7EML9	344 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	AQP7	O14520	342 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	BCKDK	O14874	412 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	T	O15178	435 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	PLOD3	O60568	738 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	HCN1	O60741	890 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	TRIM3	O75382	744 aa	Predicted RBP	15.02	■□□□□ -0
DDR1-231	ENST00000417521	PPM1B	O75688	479 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	LRAT	O95237	230 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	TGDS	O95455	350 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	ABCB1	P08183	1280 aa	Predicted RBP	15.02	■□□□□ -0
DDR1-231	ENST00000417521	MAPK1	P28482	360 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	GXYLT1	Q4G148	440 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	TMEM211	Q6ICI0	200 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	C3P1	Q6ZMU1	363 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	NUP54	Q7Z3B4	507 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	TICAM1	Q8IUC6	712 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	FAM9C	Q8IZT9	166 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	OR9A2	Q8NGT5	310 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	GFM2	Q969S9	779 aa	Known RBP	15.02	■□□□□ -0
DDR1-231	ENST00000417521	ZNF703	Q9H7S9	590 aa	Predicted RBP	15.02	■□□□□ -0
DDR1-231	ENST00000417521	ACKR4	Q9NPB9	350 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	B4GALT7	Q9UBV7	327 aa		15.02	■□□□□ -0
DDR1-231	ENST00000417521	GPR55	Q9Y2T6	319 aa	Predicted RBP	15.02	■□□□□ -0
DDR1-231	ENST00000417521	NPIPA2	E9PIF3	369 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	NPIPA3	F8WFD2	350 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	AKAP10	O43572	662 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	SLITRK5	O94991	958 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	CELA3A	P09093	270 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	ALDOC	P09972	364 aa	Known RBP	15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	RFPL3S	P0C7P2	107 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	G6PD	P11413	515 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	CASP3	P42574	277 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	MAN2A2	P49641	1150 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	SEC24C	P53992	1094 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	GNGT1	P63211	74 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	PTGR1	Q14914	329 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	LSM12	Q3MHD2	195 aa	Known RBP	15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	EMC4	Q5J8M3	183 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	TMEM81	Q6P7N7	255 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	PRR22	Q8IZ63	422 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	ACTRT2	Q8TDY3	377 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	KAT2A	Q92830	837 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	NTNG2	Q96CW9	530 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	ZNF597	Q96LX8	424 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	RILP	Q96NA2	401 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	LDAH	Q9H6V9	325 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	CHST11	Q9NPF2	352 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	NOP53	Q9NZM5	478 aa	Known RBP	15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	EIF3L	Q9Y262	564 aa	Known RBP	15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	LIPG	Q9Y5X9	500 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	TRGV5	A0A0B4J1U4	118 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	FRG2C	A6NGY1	282 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	LSP1	P33241	339 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	PSPH	P78330	225 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	PLCXD2	Q0VAA5	305 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	MAD2L1	Q13257	205 aa	Predicted RBP	15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	NNAT	Q16517	81 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	PRSS53	Q2L4Q9	553 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	ZNF630	Q2M218	657 aa	Predicted RBP	15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	SMU1	Q2TAY7	513 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	OGFOD2	Q6N063	350 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	PACS2	Q86VP3	889 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	NUDT8	Q8WV74	236 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	SARAF	Q96BY9	339 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	OMA1	Q96E52	524 aa		15.01	□□□□□ -0.01
DDR1-231	ENST00000417521	CHMP6	Q96FZ7	201 aa		15.01	□□□□□ -0.01

Retrieved 100 of 20,778 RNA–protein pairs in 27 ms