RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 RELL2Q8NC24 303 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 NAXEQ8NCW5 288 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 FAM76AQ8TAV0 307 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 VSTM2LQ96N03 204 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 OR2B2Q9GZK3 357 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 ANKRA2Q9H9E1 313 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 CALHM2Q9HA72 323 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 FOLH1BQ9HBA9 442 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 RRAGDQ9NQL2 400 aaPredicted RBP16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 TAS2R9Q9NYW1 312 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 SENP1Q9P0U3 644 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 MAPRE3Q9UPY8 281 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 MED12Q93074 2177 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 SPG11Q96JI7 2443 aa16.03■□□□□ 0.16
PDLIM2-208ENST00000416159 MYO1GB0I1T2 1018 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 TSPAN2O60636 221 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 PLIN3O60664 434 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 SLITRK5O94991 958 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 BMP5P22003 454 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 ASCL1P50553 236 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 PNLIPRP2P54317 469 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 MRPS22P82650 360 aaKnown RBP16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 RCAN2Q14206 197 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 FBXL19-AS1Q494R0 122 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 ENPP6Q6UWR7 440 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 FRMD7Q6ZUT3 714 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 TRIM46Q7Z4K8 759 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 PLCZ1Q86YW0 608 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 RDH11Q8TC12 318 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 ZPLD1Q8TCW7 415 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 UBLCP1Q8WVY7 318 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 TRIM44Q96DX7 344 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 TRIB1Q96RU8 372 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 ADOQ96SZ5 270 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 SERHLQ9NQF3 203 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 MIEF1Q9NQG6 463 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 TAS2R7Q9NYW3 318 aa16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 FOXD3Q9UJU5 478 aaPredicted RBP16.02■□□□□ 0.16
PDLIM2-208ENST00000416159 F8P00451 2351 aa16.02■□□□□ 0.15
PDLIM2-208ENST00000416159 A0A087WV62 115 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 MBD3L4A6NDZ8 208 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 MBD3L3A6NE82 208 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 MBD3L5A6NJ08 208 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 KDM4EB2RXH2 506 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 COQ9O75208 318 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 RSL1D1O76021 490 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 SHBGP04278 402 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 CPA3P15088 417 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 CPN1P15169 458 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 IL12BP29460 328 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 SRD5A2P31213 254 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 UQCRC1P31930 480 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 KIR2DL3P43628 341 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 SLCO1A2P46721 670 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 WNT3P56703 355 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 CORO7P57737 925 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 TESK1Q15569 626 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 DCST1Q5T197 706 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 FAM71E1Q6IPT2 247 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 POMZP3Q6PJE2 187 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 LARP4Q71RC2 724 aaKnown RBP eCLIP16.01■□□□□ 0.152e-7■■■■■ 28.3
PDLIM2-208ENST00000416159 SLC44A2Q8IWA5 706 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 CCDC63Q8NA47 563 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 OR7G2Q8NG99 324 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 OR14L1PQ8NHC6 308 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 MBD3L2Q8NHZ7 208 aaPredicted RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 CDC26Q8NHZ8 85 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 RNASE6Q93091 150 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 METTL2AQ96IZ6 378 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 MYNNQ9NPC7 610 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 OXSMQ9NWU1 459 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 MRPS18CQ9Y3D5 142 aaKnown RBP16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 WIF1Q9Y5W5 379 aa16.01■□□□□ 0.15
PDLIM2-208ENST00000416159 DOCK7Q96N67 2140 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 OTOGQ6ZRI0 2925 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 COPEO14579 308 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 NME6O75414 186 aaPredicted RBP16■□□□□ 0.15
PDLIM2-208ENST00000416159 UROSP10746 265 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 CYP4B1P13584 511 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 CTSSP25774 331 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 NCBP2P52298 156 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM2-208ENST00000416159 ZNF136P52737 540 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 NPSR1Q6W5P4 371 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 TRIM42Q8IWZ5 723 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 LRRN4CLQ8ND94 238 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16■□□□□ 0.154e-7■■■■■ 58.1
PDLIM2-208ENST00000416159 SH3GL2Q99962 352 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 MID2Q9UJV3 735 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 OR10H1Q9Y4A9 318 aa16■□□□□ 0.15
PDLIM2-208ENST00000416159 POLR3HQ9Y535 204 aaPredicted RBP16■□□□□ 0.15
PDLIM2-208ENST00000416159 ANKRD17O75179 2603 aaKnown RBP16■□□□□ 0.15
PDLIM2-208ENST00000416159 MPDZO75970 2070 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 PLOD2O00469 737 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 IL18BPO95998 194 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 JUNP05412 331 aaKnown RBP15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 NTSP30990 170 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 OPRM1P35372 400 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 PSG6Q00889 435 aa15.99■□□□□ 0.15
PDLIM2-208ENST00000416159 PRSS53Q2L4Q9 553 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms