RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 CEP41Q9BYV8 373 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 NAT10Q9H0A0 1025 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 BRF2Q9HAW0 419 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 GRHL1Q9NZI5 618 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 CAMK2AQ9UQM7 478 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 DUSP10Q9Y6W6 482 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PSMD12O00232 456 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 SMAD7O15105 426 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 NIPSNAP2O75323 286 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 CBX7O95931 251 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 VSIG8P0DPA2 414 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 PRPH2P23942 346 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 MAP2K6P52564 334 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 RWDD2BP57060 319 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 RPS3AP61247 264 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ITGADQ13349 1161 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 HECTD2Q5U5R9 776 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 FAM45BPQ6NSW5 357 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ZCCHC12Q6PEW1 402 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 LUZP1Q86V48 1076 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 RETREG3Q86VR2 466 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 SAMD14Q8IZD0 417 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ZNF433Q8N7K0 673 aaPredicted RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 FAM45AQ8TCE6 357 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 DIO2Q92813 273 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 FAR2Q96K12 515 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 ATG10Q9H0Y0 220 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 XAB2Q9HCS7 855 aaKnown RBP5.39□□□□□ -1.55
LMBR1-204ENST00000415428 HOMER3Q9NSC5 361 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 TAS2R13Q9NYV9 303 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 OPN4Q9UHM6 478 aa5.39□□□□□ -1.55
LMBR1-204ENST00000415428 B9A039 149 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 TAPBPO15533 448 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 DYRK3O43781 588 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 NDUFS3O75489 264 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 RP2O75695 350 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 PLAUP00749 431 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 HSP90AA1P07900 732 aaKnown RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 RGS4P49798 205 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 GDF10P55107 478 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 NRG3P56975 720 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 VEZF1Q14119 521 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 DEFB134Q4QY38 66 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 KHDRBS2Q5VWX1 349 aaKnown RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 OR4C11Q6IEV9 310 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 B3GLCTQ6Y288 498 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 GALNT10Q86SR1 603 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 LRRC39Q96DD0 335 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 ZNF778Q96MU6 729 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 DGAT2Q96PD7 388 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 DOK1Q99704 481 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 LINC00470Q9BZP3 86 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 REXO4Q9GZR2 422 aaKnown RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 SDHAF3Q9NRP4 125 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 ABHD10Q9NUJ1 306 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 IRAK4Q9NWZ3 460 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 GRID1Q9ULK0 1009 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 LIPT1Q9Y234 373 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 CLCA3PQ9Y6N3 262 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 IQCF5A8MTL0 148 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 ZNHIT1O43257 154 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 B4GALT2O60909 372 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 DHRS4L1P0CG22 281 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 HSD3B1P14060 373 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 GNAZP19086 355 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 HSD3B2P26439 372 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 PPM1FP49593 454 aaPredicted RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 SUCLG1P53597 346 aaKnown RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 GPR85P60893 370 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 SULT1C3Q6IMI6 304 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 TMIGD1Q6UXZ0 262 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 ACOT4Q8N9L9 421 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 WDR31Q8NA23 367 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 FAM71CQ8NEG0 241 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 RIT1Q92963 219 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 CPNE4Q96A23 557 aaPredicted RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 ANP32EQ9BTT0 268 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 OPN3Q9H1Y3 402 aaPredicted RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 MAT2BQ9NZL9 334 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 NPAP1Q9NZP6 1156 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 PCDHA9Q9Y5H5 950 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 OR5H1A6NKK0 313 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 BUD23O43709 281 aaKnown RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 NMBRP28336 390 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 SPANXN3Q5MJ09 141 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 GALNT18Q6P9A2 607 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 KLHL17Q6TDP4 642 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 PPM1NQ8N819 430 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 ZNF614Q8N883 585 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 OR4F15Q8NGB8 312 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 PSMA8Q8TAA3 256 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.38□□□□□ -1.555e-7■■■■□ 21.5
LMBR1-204ENST00000415428 GFM2Q969S9 779 aaKnown RBP5.38□□□□□ -1.55
LMBR1-204ENST00000415428 SIGLEC10Q96LC7 697 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 UBXN10Q96LJ8 280 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 FBXL3Q9UKT7 428 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 SPACA6W5XKT8 324 aa5.38□□□□□ -1.55
LMBR1-204ENST00000415428 B4DSR2 109 aa5.37□□□□□ -1.55
LMBR1-204ENST00000415428 ALG1L2C9J202 215 aa5.37□□□□□ -1.55
LMBR1-204ENST00000415428 NPIPB9F8W1W9 429 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms