RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 ABRAXAS2Q15018 415 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 NSDHLQ15738 373 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 TBCCQ15814 346 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 BTBD16Q32M84 506 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ZIK1Q3SY52 487 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 KRT71Q3SY84 523 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 SFT2D3Q587I9 215 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ZNF678Q5SXM1 525 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 LIPJQ5W064 366 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 B3GNTL1Q67FW5 361 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 EMBQ6PCB8 327 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 TMEM205Q6UW68 189 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 SH2D5Q6ZV89 423 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 NDUFAF7Q7L592 441 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 CPEB2Q7Z5Q1 589 aaKnown RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 TDRPQ86YL5 185 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 CPOQ8IVL8 374 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 SLC44A2Q8IWA5 706 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 SRRM1Q8IYB3 904 aaKnown RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 KIF2BQ8N4N8 673 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 LINC01356Q8N9X3 169 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 LSM14AQ8ND56 463 aaKnown RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 PSD4Q8NDX1 1056 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 TTLQ8NG68 377 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ACMSDQ8TDX5 336 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 DOK4Q8TEW6 326 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 UCN3Q969E3 161 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 UBE2E3Q969T4 207 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 CNDP1Q96KN2 507 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 IP6K3Q96PC2 410 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ZIM3Q96PE6 472 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 LRRC37BQ96QE4 947 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 LMF1Q96S06 567 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 MAPKAP1Q9BPZ7 522 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 WDR77Q9BQA1 342 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 ERVK-6Q9BXR3 956 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 TP63Q9H3D4 680 aaPredicted RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 NT5DC2Q9H857 520 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 MSL2Q9HCI7 577 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 SEPSECSQ9HD40 501 aaKnown RBP4.55□□□□□ -1.68
VPS41-205ENST00000414632 PRTFDC1Q9NRG1 225 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 PLA2G3Q9NZ20 509 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 COPG2Q9UBF2 871 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 DCDC2Q9UHG0 476 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 ZNF225Q9UK10 706 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 SLC13A4Q9UKG4 626 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 TMCO1Q9UM00 188 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 FIS1Q9Y3D6 152 aa4.55□□□□□ -1.68
VPS41-205ENST00000414632 EXPH5Q8NEV8 1989 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SHANK1Q9Y566 2161 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 HELZ2Q9BYK8 2649 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 A0A1W2PS29 197 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 GLOD5A6NK44 160 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 A6NLC8 198 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 WASHC1A8K0Z3 465 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 H0YIV9 168 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 UBFD1O14562 309 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 PCDH17O14917 1159 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PLIN3O60664 434 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 LDB3O75112 727 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 CEACAM4O75871 244 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 GSTA1P08263 222 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 INHBBP09529 407 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PRR35P0CG20 571 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SFTPCP11686 197 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PLA2G2AP14555 144 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 CHN1P15882 459 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 IMPDH1P20839 514 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 HIST1H1TP22492 207 aaPredicted RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 CPN2P22792 545 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 GCSHP23434 173 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 JAK1P23458 1154 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ATP5F1P24539 256 aaPredicted RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 ATP5A1P25705 553 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 HMOX2P30519 316 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PTGER1P34995 402 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PRKAA2P54646 552 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SLURP1P55000 103 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 MTTPP55157 894 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 FOXA1P55317 472 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 HNRNPH2P55795 449 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 SKP1P63208 163 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PHEXP78562 749 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 SLC18A2Q05940 514 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ZNF33BQ06732 778 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 TGM3Q08188 693 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 KLRB1Q12918 225 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 IFT88Q13099 833 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 AIMP2Q13155 320 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 SLAMF1Q13291 335 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 EFR3AQ14156 821 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 E2F2Q14209 437 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 PCLAFQ15004 111 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ELAVL1Q15717 326 aaKnown RBP4.54□□□□□ -1.68
VPS41-205ENST00000414632 IGFBP7Q16270 282 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 AP5B1Q2VPB7 878 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ADPRMQ3LIE5 342 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 CEP85LQ5SZL2 805 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 DEPDC1Q5TB30 811 aa4.54□□□□□ -1.68
VPS41-205ENST00000414632 ATPAF1Q5TC12 328 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms