RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TMEM41AQ96HV5 264 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 PKNOX2Q96KN3 472 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 VSTM2LQ96N03 204 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 COL21A1Q96P44 957 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 BTBD9Q96Q07 612 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 PAIP2Q9BPZ3 127 aaKnown RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 OSBPL11Q9BXB4 747 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 GLIPR2Q9H4G4 154 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ACKR4Q9NPB9 350 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 PNPLA3Q9NST1 481 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ALKBH4Q9NXW9 302 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 BAIAP2L1Q9UHR4 511 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 ZDHHC2Q9UIJ5 367 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 MRTO4Q9UKD2 239 aaKnown RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 C19orf53Q9UNZ5 99 aaPredicted RBP10.27□□□□□ -0.77
RFFL-204ENST00000414419 ACTL7BQ9Y614 415 aa10.27□□□□□ -0.77
RFFL-204ENST00000414419 PKDREJQ9NTG1 2253 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 C15orf38-AP3S2A0A0A6YYH1 394 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 OR6C70A6NIJ9 312 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 PLOD2O00469 737 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ADAM10O14672 748 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 GNB5O14775 395 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 HNRNPRO43390 633 aaKnown RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 ICOSLGO75144 302 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 UGT2B11O75310 529 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 NME6O75414 186 aaPredicted RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 SNUPNO95149 360 aaKnown RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 SERPINE1P05121 402 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 CT45A8P0DMV1 189 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 CT45A9P0DMV2 189 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 BCKDHAP12694 445 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ACVR2AP27037 513 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 GCKP35557 465 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 HPCAL1P37235 193 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 RPL3P39023 403 aaKnown RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 TRPC1P48995 793 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 MANFP55145 182 aaKnown RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 CORO7P57737 925 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 HSPB3Q12988 150 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 CHI3L2Q15782 390 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 PRSS53Q2L4Q9 553 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 CT45A2Q5DJT8 189 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 HHATQ5VTY9 493 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 CRYBG3Q68DQ2 2970 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ANKRD26P1Q6NSI1 321 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 TMEM81Q6P7N7 255 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ANGPTL8Q6UXH0 198 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 LRIG3Q6UXM1 1119 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ACAD11Q709F0 780 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 LARP4Q71RC2 724 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFFL-204ENST00000414419 SZRD1Q7Z422 152 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 FNDC5Q8NAU1 212 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 OR10Q1Q8NGQ4 319 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 NEIL3Q8TAT5 605 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 HGDQ93099 445 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 TUBGCP3Q96CW5 907 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 MTERF3Q96E29 417 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ELP4Q96EB1 424 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 DTNBP1Q96EV8 351 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ZBED6CLQ96FA7 236 aaPredicted RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 PGM2Q96G03 612 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 FCRL1Q96LA6 429 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 GNRHR2Q96P88 292 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 NODALQ96S42 347 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 DMRTA2Q96SC8 542 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 ADOQ96SZ5 270 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 C3orf14Q9HBI5 128 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 Q9N2J8 555 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 TNFRSF10DQ9UBN6 386 aa10.26□□□□□ -0.77
RFFL-204ENST00000414419 EXO1Q9UQ84 846 aaKnown RBP10.26□□□□□ -0.77
RFFL-204ENST00000414419 C2orf72A6NCS6 295 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 PRAMEF25A6NGN4 478 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 UPK1AO00322 258 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 WDR1O75083 606 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 HOXD4P09016 255 aaPredicted RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 PRPS2P11908 318 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 GABRA1P14867 456 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 GRK2P25098 689 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 PNLIPRP2P54317 469 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 PRKAG1P54619 331 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 PSMD4P55036 377 aaKnown RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 ABCE1P61221 599 aaKnown RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 PMPCAQ10713 525 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 MAD2L1Q13257 205 aaPredicted RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 DECR1Q16698 335 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 ZNF630Q2M218 657 aaPredicted RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 VPS26BQ4G0F5 336 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 CYP27C1Q4G0S4 372 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 XKR7Q5GH72 579 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 EMC4Q5J8M3 183 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 TIGD3Q6B0B8 471 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 DESI1Q6ICB0 168 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 NPSR1Q6W5P4 371 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 B3GNT6Q6ZMB0 384 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 ZNF551Q7Z340 670 aaPredicted RBP10.25□□□□□ -0.77
RFFL-204ENST00000414419 KIRREL3Q8IZU9 778 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 OR2L13Q8N349 312 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 CEP70Q8NHQ1 597 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 ASB5Q8WWX0 329 aa10.25□□□□□ -0.77
RFFL-204ENST00000414419 CIDECQ96AQ7 238 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms