RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 FIG4Q92562 907 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 POP5Q969H6 163 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 RPL10LQ96L21 214 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 C16orf92Q96LL3 132 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 APOLD1Q96LR9 279 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MYADMQ96S97 322 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 MBOAT4Q96T53 435 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 RPP25Q9BUL9 199 aaKnown RBP8.86□□□□□ -0.99
SNHG3-201ENST00000413987 NELFAQ9H3P2 528 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 GSTO2Q9H4Y5 243 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 TNFRSF12AQ9NP84 129 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 DOCK8Q8NF50 2099 aa8.86□□□□□ -0.99
SNHG3-201ENST00000413987 A0A0A6YYJ9 748 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ATP6AP2A0A1C7CYW4 349 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 NEMP2A6NFY4 417 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 METTL15A6NJ78 407 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 GABRR3A8MPY1 467 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 K7EQM0 130 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 HS3ST1O14792 307 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 MATN3O15232 486 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CLDN11O75508 207 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ATP6AP2O75787 350 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 AMY2AP04746 511 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ARSAP15289 507 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 AMY2BP19961 511 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 HLA-FP30511 346 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 HTR7P34969 479 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ARL1P40616 181 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 RAB28P51157 221 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 LSM3P62310 102 aaKnown RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PPP2R2BQ00005 443 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PIGFQ07326 219 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CDK5R2Q13319 367 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CSHL1Q14406 222 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 GPR176Q14439 515 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CLEC6AQ6EIG7 209 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 KIAA0930Q6ICG6 404 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ARSKQ6UWY0 536 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ADAMTSL2Q86TH1 951 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 C12orf40Q86WS4 652 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 SFTPA1Q8IWL2 248 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PM20D2Q8IYS1 436 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 UBQLNLQ8IYU4 475 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 AMER2Q8N7J2 671 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 HJURPQ8NCD3 748 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 OR6K2Q8NGY2 324 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PIGKQ92643 395 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF607Q96SK3 696 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 KXD1Q9BQD3 176 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 TMEM246Q9BRR3 403 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PEF1Q9UBV8 284 aaKnown RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 WDFY4Q6ZS81 3184 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 A0A0U1RQS6 177 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 EFCAB9A8MZ26 197 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 LOC110117498-PIK3R3F6TDL0 507 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CCRL2O00421 344 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PMPCBO75439 489 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ANGPTL1O95841 491 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CD160O95971 181 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 TPH1P17752 444 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 HRH2P25021 359 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 POU1F1P28069 291 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PDHA2P29803 388 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 SLC26A3P40879 764 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CHRNA4P43681 627 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 STK19P49842 368 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 NPTX1Q15818 432 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 RABL3Q5HYI8 236 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ZNF678Q5SXM1 525 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ZDHHC20Q5W0Z9 365 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 NHLRC1Q6VVB1 395 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CYHR1Q6ZMK1 362 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 RAB44Q7Z6P3 723 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 RTN4RL2Q86UN3 420 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 SPATA6LQ8N4H0 392 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 RASGEF1AQ8N9B8 481 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 C2CD4AQ8NCU7 369 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 OR8J2Q8NGG1 315 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 SORCS1Q8WY21 1168 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PIK3R3Q92569 461 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 FGF14Q92915 247 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 DTD2Q96FN9 168 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 NSUN5Q96P11 429 aaKnown RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 SMIM14Q96QK8 99 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CITED1Q99966 193 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ADGRE3Q9BY15 652 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PLA2G2FQ9BZM2 168 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 AMBRA1Q9C0C7 1298 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 DCSTAMPQ9H295 470 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 DUSP21Q9H596 190 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 AKIRIN1Q9H9L7 192 aaPredicted RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 PDFQ9HBH1 243 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 ZDHHC4Q9NPG8 344 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 SLC52A3Q9NQ40 469 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 OPTCQ9UBM4 332 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 MGAT4CQ9UBM8 478 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 RAPGEFL1Q9UHV5 662 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 NCKAP1Q9Y2A7 1128 aa8.85□□□□□ -0.99
SNHG3-201ENST00000413987 FCF1Q9Y324 198 aaKnown RBP8.85□□□□□ -0.99
SNHG3-201ENST00000413987 CHD5Q8TDI0 1954 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms